RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 LIMCH1Q9UPQ0 1083 aa21.99■■□□□ 1.11
CTDSP1-207ENST00000473420 IFNAR1P17181 557 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 SLC4A3P48751 1232 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 PRKCZQ05513 592 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 STK3Q13188 491 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 KCTD2Q14681 263 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 NTRK3Q16288 839 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 USP6NLQ92738 828 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 MMP19Q99542 508 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 HOMER2Q9NSB8 354 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 RBM27Q9P2N5 1060 aaKnown RBP21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 PTPN22Q9Y2R2 807 aa21.98■■□□□ 1.11
CTDSP1-207ENST00000473420 PPP1R11O60927 126 aaPredicted RBP21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 MAP2K5Q13163 448 aa21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 IRF5Q13568 498 aa21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 ME3Q16798 604 aa21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 USH1GQ495M9 461 aa21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 CPLX2Q6PUV4 134 aaKnown RBP21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 CCDC82Q8N4S0 544 aa21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 ZSCAN31Q96LW9 406 aaPredicted RBP21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 NCOA5Q9HCD5 579 aaKnown RBP21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 GABRQQ9UN88 632 aa21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 MRPL11Q9Y3B7 192 aaKnown RBP21.97■■□□□ 1.11
CTDSP1-207ENST00000473420 CPLX1O14810 134 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 HOXC6P09630 235 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 ADORA2AP29274 412 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 RGS2P41220 211 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 FLT3LGP49771 235 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 SCRN1Q12765 414 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 MUM1L1Q5H9M0 696 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 NOL8Q76FK4 1167 aaKnown RBP21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 RGS22Q8NE09 1264 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 RNF26Q9BY78 433 aaPredicted RBP21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 PCDHA1Q9Y5I3 950 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 PFASO15067 1338 aa21.96■■□□□ 1.11
CTDSP1-207ENST00000473420 hCG_1984214I3L0E3 225 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 PRPF3O43395 683 aaKnown RBP21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 LARGE1O95461 756 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 XRCC5P13010 732 aaKnown RBP21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 MCM2P49736 904 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 FBXO46Q6PJ61 603 aaPredicted RBP21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 ANKRD35Q8N283 1001 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 ZNF713Q8N859 430 aaPredicted RBP21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 CLEC4DQ8WXI8 215 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 PIBF1Q8WXW3 757 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 GTF3C6Q969F1 213 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 APBA2Q99767 749 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 A1CFQ9NQ94 594 aaKnown RBP21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 SH2B1Q9NRF2 756 aaPredicted RBP21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 SLC5A4Q9NY91 659 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 LCTP09848 1927 aa21.95■■□□□ 1.1
CTDSP1-207ENST00000473420 CDKL5O76039 1030 aa21.94■■□□□ 1.1
CTDSP1-207ENST00000473420 TAL1P17542 331 aaPredicted RBP21.94■■□□□ 1.1
CTDSP1-207ENST00000473420 SAMD3Q8N6K7 520 aa21.94■■□□□ 1.1
CTDSP1-207ENST00000473420 RAET1EQ8TD07 263 aa21.94■■□□□ 1.1
CTDSP1-207ENST00000473420 V9GY48 417 aaPredicted RBP21.94■■□□□ 1.1
CTDSP1-207ENST00000473420 DNAJC25-GNG10A0A024R161 153 aa21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 NFIBO00712 420 aa21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 GHRHRQ02643 423 aa21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 DPP9Q86TI2 863 aa21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 MCF2L2Q86YR7 1114 aa21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 TRMT44Q8IYL2 757 aaKnown RBP21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 PXYLP1Q8TE99 480 aa21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 DDX11Q96FC9 970 aa21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 DIS3Q9Y2L1 958 aaKnown RBP21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 PTCH2Q9Y6C5 1203 aa21.93■■□□□ 1.1
CTDSP1-207ENST00000473420 AKAP17AQ02040 695 aaKnown RBP21.92■■□□□ 1.1
CTDSP1-207ENST00000473420 PFKFB3Q16875 520 aaPredicted RBP21.92■■□□□ 1.1
CTDSP1-207ENST00000473420 TRIM22Q8IYM9 498 aa21.92■■□□□ 1.1
CTDSP1-207ENST00000473420 PHKBQ93100 1093 aa21.92■■□□□ 1.1
CTDSP1-207ENST00000473420 MAP3K20Q9NYL2 800 aaKnown RBP21.92■■□□□ 1.1
CTDSP1-207ENST00000473420 CYP39A1Q9NYL5 469 aa21.92■■□□□ 1.1
CTDSP1-207ENST00000473420 STK36Q9NRP7 1315 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 hCG_1642624A0A1W2PR95 340 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 COBLO75128 1261 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 CYP2B6P20813 491 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 SSRP1Q08945 709 aaKnown RBP21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 ZNF792Q3KQV3 632 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 PPP1R18Q6NYC8 613 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 NSMFQ6X4W1 530 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 RNF207Q6ZRF8 634 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 SLAIN1Q8ND83 568 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 SLC26A6Q9BXS9 759 aa21.91■■□□□ 1.1
CTDSP1-207ENST00000473420 OPLAHO14841 1288 aa21.9■■□□□ 1.1
CTDSP1-207ENST00000473420 ADCY3O60266 1144 aa21.9■■□□□ 1.1
CTDSP1-207ENST00000473420 SCG2P13521 617 aa21.9■■□□□ 1.1
CTDSP1-207ENST00000473420 PKN1Q16512 942 aa21.9■■□□□ 1.1
CTDSP1-207ENST00000473420 WWC2Q6AWC2 1192 aa21.9■■□□□ 1.1
CTDSP1-207ENST00000473420 NECAB1Q8N987 351 aa21.9■■□□□ 1.1
CTDSP1-207ENST00000473420 NPLOC4Q8TAT6 608 aa21.9■■□□□ 1.1
CTDSP1-207ENST00000473420 MCOLN1Q9GZU1 580 aa21.9■■□□□ 1.1
CTDSP1-207ENST00000473420 BARHL2Q9NY43 387 aa21.9■■□□□ 1.1
CTDSP1-207ENST00000473420 PTPDC1A2A3K4 754 aa21.89■■□□□ 1.09
CTDSP1-207ENST00000473420 POTEB2H3BUK9 544 aa21.89■■□□□ 1.09
CTDSP1-207ENST00000473420 CD2BP2O95400 341 aaKnown RBP21.89■■□□□ 1.09
CTDSP1-207ENST00000473420 DEXIO95424 95 aa21.89■■□□□ 1.09
CTDSP1-207ENST00000473420 PGK2P07205 417 aa21.89■■□□□ 1.09
CTDSP1-207ENST00000473420 GRK4P32298 578 aa21.89■■□□□ 1.09
CTDSP1-207ENST00000473420 OLFML2BQ68BL8 750 aa21.89■■□□□ 1.09
CTDSP1-207ENST00000473420 HEATR3Q7Z4Q2 680 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms