RNA–Protein interactions for RNA: ENST00000473222.1

NR1H3-218, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-218ENST00000473222 GJD2Q9UKL4 321 aa20.52■□□□□ 0.88
NR1H3-218ENST00000473222 PCDHA1Q9Y5I3 950 aa20.52■□□□□ 0.88
NR1H3-218ENST00000473222 ABCB11O95342 1321 aa20.52■□□□□ 0.87
NR1H3-218ENST00000473222 hCG_1642624A0A1W2PR95 340 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 TNPO2O14787 897 aaKnown RBP20.51■□□□□ 0.87
NR1H3-218ENST00000473222 CDKL5O76039 1030 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 HOXD10P28358 340 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 SSRP1Q08945 709 aaKnown RBP20.51■□□□□ 0.87
NR1H3-218ENST00000473222 ST3GAL1Q11201 340 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 PKN1Q16512 942 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 RGS22Q8NE09 1264 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 CLEC4DQ8WXI8 215 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 PHKBQ93100 1093 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 TMX3Q96JJ7 454 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 RNF146Q9NTX7 359 aa20.51■□□□□ 0.87
NR1H3-218ENST00000473222 MRPL11Q9Y3B7 192 aaKnown RBP20.51■□□□□ 0.87
NR1H3-218ENST00000473222 SLC15A5A6NIM6 579 aa20.5■□□□□ 0.87
NR1H3-218ENST00000473222 FCER1AP12319 257 aa20.5■□□□□ 0.87
NR1H3-218ENST00000473222 AKAP17AQ02040 695 aaKnown RBP20.5■□□□□ 0.87
NR1H3-218ENST00000473222 PFKFB3Q16875 520 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-218ENST00000473222 USH1GQ495M9 461 aa20.5■□□□□ 0.87
NR1H3-218ENST00000473222 MUM1L1Q5H9M0 696 aa20.5■□□□□ 0.87
NR1H3-218ENST00000473222 MORN1Q5T089 497 aa20.5■□□□□ 0.87
NR1H3-218ENST00000473222 USP6NLQ92738 828 aa20.5■□□□□ 0.87
NR1H3-218ENST00000473222 SLC26A6Q9BXS9 759 aa20.5■□□□□ 0.87
NR1H3-218ENST00000473222 ACAD9Q9H845 621 aa20.5■□□□□ 0.87
NR1H3-218ENST00000473222 ZSWIM8A7E2V4 1837 aa20.49■□□□□ 0.87
NR1H3-218ENST00000473222 ECM2O94769 699 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-218ENST00000473222 TAL1P17542 331 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-218ENST00000473222 GRB14Q14449 540 aa20.49■□□□□ 0.87
NR1H3-218ENST00000473222 WDR78Q5VTH9 848 aa20.49■□□□□ 0.87
NR1H3-218ENST00000473222 TRIM22Q8IYM9 498 aa20.49■□□□□ 0.87
NR1H3-218ENST00000473222 LLPHQ9BRT6 129 aaKnown RBP20.49■□□□□ 0.87
NR1H3-218ENST00000473222 CWC22Q9HCG8 908 aaKnown RBP20.49■□□□□ 0.87
NR1H3-218ENST00000473222 HOMER2Q9NSB8 354 aa20.49■□□□□ 0.87
NR1H3-218ENST00000473222 SRRDQ9UH36 339 aa20.49■□□□□ 0.87
NR1H3-218ENST00000473222 IVNS1ABPQ9Y6Y0 642 aa20.49■□□□□ 0.87
NR1H3-218ENST00000473222 hCG_1984214I3L0E3 225 aa20.48■□□□□ 0.87
NR1H3-218ENST00000473222 SCG2P13521 617 aa20.48■□□□□ 0.87
NR1H3-218ENST00000473222 PRMT2P55345 433 aa20.48■□□□□ 0.87
NR1H3-218ENST00000473222 OTOP1Q7RTM1 612 aa20.48■□□□□ 0.87
NR1H3-218ENST00000473222 CCDC83Q8IWF9 413 aa20.48■□□□□ 0.87
NR1H3-218ENST00000473222 SAMD3Q8N6K7 520 aa20.48■□□□□ 0.87
NR1H3-218ENST00000473222 ZNF713Q8N859 430 aaPredicted RBP20.48■□□□□ 0.87
NR1H3-218ENST00000473222 NSUN7Q8NE18 718 aaKnown RBP20.48■□□□□ 0.87
NR1H3-218ENST00000473222 MMP19Q99542 508 aa20.48■□□□□ 0.87
NR1H3-218ENST00000473222 NUDT12Q9BQG2 462 aa20.48■□□□□ 0.87
NR1H3-218ENST00000473222 PLXNB2O15031 1838 aa20.48■□□□□ 0.87
NR1H3-218ENST00000473222 OPLAHO14841 1288 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 DEXIO95424 95 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 GHRHRQ02643 423 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 KCTD2Q14681 263 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 MCF2L2Q86YR7 1114 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 ANKRD35Q8N283 1001 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 TBC1D5Q92609 795 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 BARHL2Q9NY43 387 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 MAP3K20Q9NYL2 800 aaKnown RBP20.47■□□□□ 0.87
NR1H3-218ENST00000473222 GABRQQ9UN88 632 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 STK36Q9NRP7 1315 aa20.47■□□□□ 0.87
NR1H3-218ENST00000473222 DNAJC25-GNG10A0A024R161 153 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 NFIBO00712 420 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 PPFIA3O75145 1194 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 HOXC6P09630 235 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 FDPSP14324 419 aaKnown RBP20.46■□□□□ 0.87
NR1H3-218ENST00000473222 ADORA2AP29274 412 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 MAP2K5Q13163 448 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 WWC2Q6AWC2 1192 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 CTU1Q7Z7A3 348 aaKnown RBP20.46■□□□□ 0.87
NR1H3-218ENST00000473222 SMARCC2Q8TAQ2 1214 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 DDX11Q96FC9 970 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 A1CFQ9NQ94 594 aaKnown RBP20.46■□□□□ 0.87
NR1H3-218ENST00000473222 CYP39A1Q9NYL5 469 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 TRIM17Q9Y577 477 aa20.46■□□□□ 0.87
NR1H3-218ENST00000473222 COBLO75128 1261 aa20.45■□□□□ 0.86
NR1H3-218ENST00000473222 XRCC5P13010 732 aaKnown RBP20.45■□□□□ 0.86
NR1H3-218ENST00000473222 FLT3LGP49771 235 aa20.45■□□□□ 0.86
NR1H3-218ENST00000473222 IRF5Q13568 498 aa20.45■□□□□ 0.86
NR1H3-218ENST00000473222 CUL4AQ13619 759 aa20.45■□□□□ 0.86
NR1H3-218ENST00000473222 HEATR3Q7Z4Q2 680 aa20.45■□□□□ 0.86
NR1H3-218ENST00000473222 SOCS4Q8WXH5 440 aa20.45■□□□□ 0.86
NR1H3-218ENST00000473222 GPKOWQ92917 476 aaPredicted RBP eCLIP20.45■□□□□ 0.86
NR1H3-218ENST00000473222 SH3GLB2Q9NR46 395 aa20.45■□□□□ 0.86
NR1H3-218ENST00000473222 ORC3Q9UBD5 711 aaPredicted RBP20.45■□□□□ 0.86
NR1H3-218ENST00000473222 DIS3Q9Y2L1 958 aaKnown RBP20.45■□□□□ 0.86
NR1H3-218ENST00000473222 PFASO15067 1338 aa20.45■□□□□ 0.86
NR1H3-218ENST00000473222 STXBP3O00186 592 aa20.44■□□□□ 0.86
NR1H3-218ENST00000473222 RGS2P41220 211 aa20.44■□□□□ 0.86
NR1H3-218ENST00000473222 PRKCZQ05513 592 aa20.44■□□□□ 0.86
NR1H3-218ENST00000473222 BAATQ14032 418 aaPredicted RBP20.44■□□□□ 0.86
NR1H3-218ENST00000473222 TYW1BQ6NUM6 668 aa20.44■□□□□ 0.86
NR1H3-218ENST00000473222 NSMFQ6X4W1 530 aa20.44■□□□□ 0.86
NR1H3-218ENST00000473222 RNF207Q6ZRF8 634 aa20.44■□□□□ 0.86
NR1H3-218ENST00000473222 DPP9Q86TI2 863 aa20.44■□□□□ 0.86
NR1H3-218ENST00000473222 TEX2Q8IWB9 1127 aa20.44■□□□□ 0.86
NR1H3-218ENST00000473222 FAM177A1Q8N128 213 aaPredicted RBP20.44■□□□□ 0.86
NR1H3-218ENST00000473222 SLC5A4Q9NY91 659 aa20.44■□□□□ 0.86
NR1H3-218ENST00000473222 PTPDC1A2A3K4 754 aa20.43■□□□□ 0.86
NR1H3-218ENST00000473222 K7ELQ4 463 aaPredicted RBP20.43■□□□□ 0.86
NR1H3-218ENST00000473222 JAK2O60674 1132 aa20.43■□□□□ 0.86
NR1H3-218ENST00000473222 DTNBO60941 627 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms