RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 SEC23AQ15436 765 aa18.2■□□□□ 0.5
MRPL55-226ENST00000473066 CDC37Q16543 378 aaPredicted RBP18.2■□□□□ 0.5
MRPL55-226ENST00000473066 USH1GQ495M9 461 aa18.2■□□□□ 0.5
MRPL55-226ENST00000473066 FGD4Q96M96 766 aa18.2■□□□□ 0.5
MRPL55-226ENST00000473066 MPHOSPH6Q99547 160 aaKnown RBP18.2■□□□□ 0.5
MRPL55-226ENST00000473066 SPC25Q9HBM1 224 aa18.2■□□□□ 0.5
MRPL55-226ENST00000473066 ZMYND8Q9ULU4 1186 aaPredicted RBP18.2■□□□□ 0.5
MRPL55-226ENST00000473066 NFIBO00712 420 aa18.19■□□□□ 0.5
MRPL55-226ENST00000473066 CDC45O75419 566 aa18.19■□□□□ 0.5
MRPL55-226ENST00000473066 ATN1P54259 1190 aaPredicted RBP18.19■□□□□ 0.5
MRPL55-226ENST00000473066 LRRC26Q2I0M4 334 aa18.19■□□□□ 0.5
MRPL55-226ENST00000473066 TMEM67Q5HYA8 995 aa18.19■□□□□ 0.5
MRPL55-226ENST00000473066 HABP4Q5JVS0 413 aaKnown RBP18.19■□□□□ 0.5
MRPL55-226ENST00000473066 SKAP1Q86WV1 359 aa18.19■□□□□ 0.5
MRPL55-226ENST00000473066 CPVLQ9H3G5 476 aa18.19■□□□□ 0.5
MRPL55-226ENST00000473066 COLQQ9Y215 455 aaPredicted RBP18.19■□□□□ 0.5
MRPL55-226ENST00000473066 SOWAHBA6NEL2 793 aa18.18■□□□□ 0.5
MRPL55-226ENST00000473066 PGK1P00558 417 aa18.18■□□□□ 0.5
MRPL55-226ENST00000473066 CALML3P27482 149 aa18.18■□□□□ 0.5
MRPL55-226ENST00000473066 BAATQ14032 418 aaPredicted RBP18.18■□□□□ 0.5
MRPL55-226ENST00000473066 CCDC144BQ3MJ40 725 aa18.18■□□□□ 0.5
MRPL55-226ENST00000473066 RNF20Q5VTR2 975 aa18.18■□□□□ 0.5
MRPL55-226ENST00000473066 RNF207Q6ZRF8 634 aa18.18■□□□□ 0.5
MRPL55-226ENST00000473066 ADGRF4Q8IZF3 695 aa18.18■□□□□ 0.5
MRPL55-226ENST00000473066 LENG1Q96BZ8 264 aaPredicted RBP18.18■□□□□ 0.5
MRPL55-226ENST00000473066 LSG1Q9H089 658 aaKnown RBP18.18■□□□□ 0.5
MRPL55-226ENST00000473066 BAZ2BQ9UIF8 2168 aaKnown RBP18.18■□□□□ 0.5
MRPL55-226ENST00000473066 ABCB11O95342 1321 aa18.18■□□□□ 0.5
MRPL55-226ENST00000473066 SYNRGQ9UMZ2 1314 aa18.18■□□□□ 0.5
MRPL55-226ENST00000473066 DUSP11O75319 330 aaKnown RBP18.17■□□□□ 0.5
MRPL55-226ENST00000473066 ADCYAP1R1P41586 468 aa18.17■□□□□ 0.5
MRPL55-226ENST00000473066 RTP1P59025 263 aa18.17■□□□□ 0.5
MRPL55-226ENST00000473066 STOX1Q6ZVD7 989 aa18.17■□□□□ 0.5
MRPL55-226ENST00000473066 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
MRPL55-226ENST00000473066 CATIPQ7Z7H3 387 aa18.17■□□□□ 0.5
MRPL55-226ENST00000473066 VAT1LQ9HCJ6 419 aa18.17■□□□□ 0.5
MRPL55-226ENST00000473066 PRKAG2Q9UGJ0 569 aa18.17■□□□□ 0.5
MRPL55-226ENST00000473066 TAF6LQ9Y6J9 622 aa18.17■□□□□ 0.5
MRPL55-226ENST00000473066 TRIOBPQ9H2D6 2365 aa18.17■□□□□ 0.5
MRPL55-226ENST00000473066 LOC102724159A0A0B4J2E5 919 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 B4DLN1 442 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 KLRF2D3W0D1 207 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 C6orf222P0C671 652 aaPredicted RBP18.16■□□□□ 0.5
MRPL55-226ENST00000473066 SYN1P17600 705 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 ALDH5A1P51649 535 aaPredicted RBP18.16■□□□□ 0.5
MRPL55-226ENST00000473066 MRPL12P52815 198 aaKnown RBP18.16■□□□□ 0.5
MRPL55-226ENST00000473066 PWP2Q15269 919 aaKnown RBP18.16■□□□□ 0.5
MRPL55-226ENST00000473066 QRICH1Q2TAL8 776 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 SLC30A10Q6XR72 485 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 FBXO11Q86XK2 927 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
MRPL55-226ENST00000473066 FERMT2Q96AC1 680 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 VTA1Q9NP79 307 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 PHF24Q9UPV7 400 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 ATP11BQ9Y2G3 1177 aa18.16■□□□□ 0.5
MRPL55-226ENST00000473066 SLC27A2O14975 620 aa18.15■□□□□ 0.5
MRPL55-226ENST00000473066 ADAMTS4O75173 837 aa18.15■□□□□ 0.5
MRPL55-226ENST00000473066 MCM5P33992 734 aa18.15■□□□□ 0.5
MRPL55-226ENST00000473066 TRAF1Q13077 416 aa18.15■□□□□ 0.5
MRPL55-226ENST00000473066 GRM4Q14833 912 aa18.15■□□□□ 0.5
MRPL55-226ENST00000473066 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
MRPL55-226ENST00000473066 MCF2L2Q86YR7 1114 aa18.15■□□□□ 0.5
MRPL55-226ENST00000473066 FBXO16Q8IX29 292 aaPredicted RBP18.15■□□□□ 0.5
MRPL55-226ENST00000473066 CLEC4DQ8WXI8 215 aa18.15■□□□□ 0.5
MRPL55-226ENST00000473066 TSEN34Q9BSV6 310 aaKnown RBP18.15■□□□□ 0.5
MRPL55-226ENST00000473066 MRPL11Q9Y3B7 192 aaKnown RBP18.15■□□□□ 0.5
MRPL55-226ENST00000473066 LTBP2Q14767 1821 aa18.14■□□□□ 0.5
MRPL55-226ENST00000473066 KIAA1217Q5T5P2 1943 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 MOXD2PA6NHM9 499 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 PRC1O43663 620 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.49
MRPL55-226ENST00000473066 RPS6P62753 249 aaKnown RBP18.14■□□□□ 0.49
MRPL55-226ENST00000473066 TNFAIP2Q03169 654 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 PDE4DQ08499 809 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 SLC39A5Q6ZMH5 540 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 NFXL1Q6ZNB6 911 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 EEPD1Q7L9B9 569 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 STAG2Q8N3U4 1231 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 PCSK9Q8NBP7 692 aaKnown RBP18.14■□□□□ 0.49
MRPL55-226ENST00000473066 NUP133Q8WUM0 1156 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 MTA3Q9BTC8 594 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 AMNQ9BXJ7 453 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 MAF1Q9H063 256 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 AP5M1Q9H0R1 490 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 JMJD4Q9H9V9 463 aa18.14■□□□□ 0.49
MRPL55-226ENST00000473066 A0A1W2PQ45 241 aaPredicted RBP18.13■□□□□ 0.49
MRPL55-226ENST00000473066 A0A1W2PQY0 241 aa18.13■□□□□ 0.49
MRPL55-226ENST00000473066 ANTXR2P58335 489 aa18.13■□□□□ 0.49
MRPL55-226ENST00000473066 HOMER1Q86YM7 354 aa18.13■□□□□ 0.49
MRPL55-226ENST00000473066 DNERQ8NFT8 737 aa18.13■□□□□ 0.49
MRPL55-226ENST00000473066 CTCFLQ8NI51 663 aaPredicted RBP18.13■□□□□ 0.49
MRPL55-226ENST00000473066 TMEM87BQ96K49 555 aa18.13■□□□□ 0.49
MRPL55-226ENST00000473066 KATNBL1Q9H079 304 aa18.13■□□□□ 0.49
MRPL55-226ENST00000473066 STARD7Q9NQZ5 370 aa18.13■□□□□ 0.49
MRPL55-226ENST00000473066 RBM27Q9P2N5 1060 aaKnown RBP18.13■□□□□ 0.49
MRPL55-226ENST00000473066 MAD2L2Q9UI95 211 aa18.13■□□□□ 0.49
MRPL55-226ENST00000473066 ASTN1O14525 1302 aa18.13■□□□□ 0.49
MRPL55-226ENST00000473066 A0A1W2PPC1 479 aa18.12■□□□□ 0.49
MRPL55-226ENST00000473066 PALM3A6NDB9 673 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms