RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 USP26Q9BXU7 913 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 LSG1Q9H089 658 aaKnown RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 ZBTB21Q9ULJ3 1066 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 RABGAP1Q9Y3P9 1069 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 PCDHB3Q9Y5E6 796 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 REV3LO60673 3130 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 M0R2C6 588 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 NR1I2O75469 434 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 ZFYP08048 801 aaPredicted RBP7.55□□□□□ -1.2
HDAC1-205ENST00000472928 PDIA4P13667 645 aaKnown RBP7.55□□□□□ -1.2
HDAC1-205ENST00000472928 PDE6AP16499 860 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 ATP2B2Q01814 1243 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 SLFNL1Q499Z3 407 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 ZMYM1Q5SVZ6 1142 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 C1orf53Q5VUE5 145 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 ANO1Q5XXA6 986 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 ZSCAN25Q6NSZ9 544 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 TICAM2Q86XR7 235 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 TEX11Q8IYF3 940 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 SH3RF3Q8TEJ3 882 aaPredicted RBP7.55□□□□□ -1.2
HDAC1-205ENST00000472928 ATXN2LQ8WWM7 1075 aaKnown RBP7.55□□□□□ -1.2
HDAC1-205ENST00000472928 C12orf42Q96LP6 360 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 ASB2Q96Q27 587 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 SEC62Q99442 399 aaKnown RBP7.55□□□□□ -1.2
HDAC1-205ENST00000472928 GINM1Q9NU53 330 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 BTBD7Q9P203 1132 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 PI4KBQ9UBF8 816 aa7.55□□□□□ -1.2
HDAC1-205ENST00000472928 XIRP2A4UGR9 3374 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 PRRC2BQ5JSZ5 2229 aaKnown RBP7.54□□□□□ -1.2
HDAC1-205ENST00000472928 KBTBD13C9JR72 458 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 KIAA0355O15063 1070 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 ADD2P35612 726 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 ADCYAP1R1P41586 468 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 CCNA1P78396 465 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 PTH1RQ03431 593 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 LRRC41Q15345 812 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 MCMDC2Q4G0Z9 681 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 SLC9C2Q5TAH2 1124 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 OLFML2BQ68BL8 750 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L2Q6R6M4 530 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 LBX2Q6XYB7 198 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 ARRDC4Q8NCT1 418 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 APPBP2Q92624 585 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 FERMT2Q96AC1 680 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 TIFAQ96CG3 184 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 UHRF1Q96T88 793 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-205ENST00000472928 ALG2Q9H553 416 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 ZNF576Q9H609 170 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 HELLSQ9NRZ9 838 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 THEGQ9P2T0 379 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 RBM8AQ9Y5S9 174 aaKnown RBP7.54□□□□□ -1.2
HDAC1-205ENST00000472928 SMCHD1A6NHR9 2005 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 TRANK1O15050 2925 aa7.54□□□□□ -1.2
HDAC1-205ENST00000472928 FLT1P17948 1338 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 SYNGAP1Q96PV0 1343 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 ZNF532Q9HCE3 1301 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.53□□□□□ -1.2
HDAC1-205ENST00000472928 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.53□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L15C9J2P7 530 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L13C9JLJ4 530 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L11C9JVI0 530 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L18D6R9N7 530 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L22D6RA61 530 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L17D6RBQ6 530 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L19D6RCP7 530 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L20D6RJB6 530 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 SEPT4O43236 478 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 EPB41L2O43491 1005 aaKnown RBP7.53□□□□□ -1.2
HDAC1-205ENST00000472928 LDHCP07864 332 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 CLTBP09497 229 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 VCAM1P19320 739 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 GSTO1P78417 241 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L24Q0WX57 530 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 ADGRE1Q14246 886 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 FAM47AQ5JRC9 791 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 AKNAD1Q5T1N1 836 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 WDR78Q5VTH9 848 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 CATSPERGQ6ZRH7 1159 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 MAPKAPK5Q8IW41 473 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 MAGEB6Q8N7X4 407 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 PPM1EQ8WY54 764 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 OSBP2Q969R2 916 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 IPO9Q96P70 1041 aaKnown RBP7.53□□□□□ -1.2
HDAC1-205ENST00000472928 NECAB3Q96P71 396 aaPredicted RBP7.53□□□□□ -1.2
HDAC1-205ENST00000472928 DHX36Q9H2U1 1008 aaKnown RBP7.53□□□□□ -1.2
HDAC1-205ENST00000472928 CWC22Q9HCG8 908 aaKnown RBP7.53□□□□□ -1.2
HDAC1-205ENST00000472928 RAI14Q9P0K7 980 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 LRP2BPQ9P2M1 347 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 PALD1Q9ULE6 856 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 PHF24Q9UPV7 400 aa7.53□□□□□ -1.2
HDAC1-205ENST00000472928 ZNF236Q9UL36 1845 aa7.52□□□□□ -1.2
HDAC1-205ENST00000472928 MYH6P13533 1939 aa7.52□□□□□ -1.2
HDAC1-205ENST00000472928 TCF20Q9UGU0 1960 aaKnown RBP7.52□□□□□ -1.21
HDAC1-205ENST00000472928 TCRBV5S4A2TA0A5A2 114 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 GPAA1O43292 621 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 COBLO75128 1261 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 MBD4O95243 580 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 F12P00748 615 aaPredicted RBP7.52□□□□□ -1.21
HDAC1-205ENST00000472928 GH2P01242 217 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 JUNDP17535 347 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms