RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 RCAN1P53805 252 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 AK2P54819 239 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 EVCP57679 992 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 EXOSC10Q01780 885 aaKnown RBP7.76□□□□□ -1.17
VAMP3-202ENST00000470357 USP4Q13107 963 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 NOM1Q5C9Z4 860 aaKnown RBP7.76□□□□□ -1.17
VAMP3-202ENST00000470357 SYNE3Q6ZMZ3 975 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 Q6ZUG5 572 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 PLPP7Q8NBV4 271 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 DCPSQ96C86 337 aaKnown RBP7.76□□□□□ -1.17
VAMP3-202ENST00000470357 CDCA5Q96FF9 252 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 ZNF274Q96GC6 653 aaPredicted RBP7.76□□□□□ -1.17
VAMP3-202ENST00000470357 TMX3Q96JJ7 454 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 OSBPL5Q9H0X9 879 aaPredicted RBP7.76□□□□□ -1.17
VAMP3-202ENST00000470357 EHD4Q9H223 541 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 R3HDMLQ9H3Y0 253 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 MKNK2Q9HBH9 465 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 PI4KBQ9UBF8 816 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 ANGEL1Q9UNK9 670 aaKnown RBP7.76□□□□□ -1.17
VAMP3-202ENST00000470357 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.76□□□□□ -1.17
VAMP3-202ENST00000470357 ATRNL1Q5VV63 1379 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 GPR25O00155 361 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 MEN1O00255 615 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 RANBP6O60518 1105 aaKnown RBP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 SKIP12755 728 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 TM4SF4P48230 202 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 FXR1P51114 621 aaKnown RBP eCLIP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 PICALMQ13492 652 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 CUL4AQ13619 759 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 PPP2R5BQ15173 497 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 KIF4BQ2VIQ3 1234 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 MAP7D1Q3KQU3 841 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 RRP12Q5JTH9 1297 aaKnown RBP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 FBXO46Q6PJ61 603 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 C16orf86Q6ZW13 317 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 MOB2Q70IA6 237 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 FAM83AQ86UY5 434 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 FOXP4Q8IVH2 680 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 ZNF444Q8N0Y2 327 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 HOOK2Q96ED9 719 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 PRMT6Q96LA8 375 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 CCDC17Q96LX7 622 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 MYOZ2Q9NPC6 264 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 GGA3Q9NZ52 723 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 ZSWIM5Q9P217 1185 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 ZNF70Q9UC06 446 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 SERPINB13Q9UIV8 391 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 KIF3AQ9Y496 699 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 TAF6LQ9Y6J9 622 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 RANBP2P49792 3224 aaKnown RBP7.75□□□□□ -1.17
VAMP3-202ENST00000470357 NEDD4P46934 1319 aa7.75□□□□□ -1.17
VAMP3-202ENST00000470357 MYH6P13533 1939 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 CCDC69A6NI79 296 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 TSPY2A6NKD2 308 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 IFIT3O14879 490 aaKnown RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 CALM1P0DP23 149 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 CALM2P0DP24 149 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 CALM3P0DP25 149 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 CPA1P15085 419 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 FKBP1BP68106 108 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 TOB2Q14106 344 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 WTAPQ15007 396 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 TMEM67Q5HYA8 995 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 CPLX2Q6PUV4 134 aaKnown RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 SGMS1Q86VZ5 419 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 ZSCAN29Q8IWY8 852 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 CRACR2BQ8N4Y2 399 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 FAM151AQ8WW52 585 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 BRF1Q92994 677 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 ZBED3Q96IU2 234 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 CFHR5Q9BXR6 569 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 SLKQ9H2G2 1235 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 TDRD3Q9H7E2 651 aaKnown RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 TCP11L1Q9NUJ3 509 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 SAP30BPQ9UHR5 308 aaKnown RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 HERC5Q9UII4 1024 aaKnown RBP7.74□□□□□ -1.17
VAMP3-202ENST00000470357 MYH4Q9Y623 1939 aa7.74□□□□□ -1.17
VAMP3-202ENST00000470357 PLIN4Q96Q06 1357 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 CYP2D7A0A087X1C5 515 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 CCDC196A0A1B0GTZ2 297 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 UBE2Q2LH0YL09 131 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 WNT10BO00744 389 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 SH2B2O14492 632 aaPredicted RBP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 TERTO14746 1132 aaKnown RBP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 PFKFB2O60825 505 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 CDKL5O76039 1030 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 TSPY3P0CV98 308 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 TSPY8P0CW00 308 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 CYP2D6P10635 497 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 PDCP20941 246 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 CDK8P49336 464 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 PLCD1P51178 756 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 ANTXR2P58335 489 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 GABPAQ06546 454 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 ANGEL2Q5VTE6 544 aaKnown RBP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 NFXL1Q6ZNB6 911 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 NOL8Q76FK4 1167 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms