RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 GRM4Q14833 912 aa16.5■□□□□ 0.23
TOP3B-215ENST00000470338 CDC37Q16543 378 aaPredicted RBP16.5■□□□□ 0.23
TOP3B-215ENST00000470338 PRPF38BQ5VTL8 546 aaKnown RBP16.5■□□□□ 0.23
TOP3B-215ENST00000470338 TMEM87BQ96K49 555 aa16.5■□□□□ 0.23
TOP3B-215ENST00000470338 JMJD4Q9H9V9 463 aa16.5■□□□□ 0.23
TOP3B-215ENST00000470338 LY9Q9HBG7 655 aa16.5■□□□□ 0.23
TOP3B-215ENST00000470338 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
TOP3B-215ENST00000470338 CEP290O15078 2479 aa16.5■□□□□ 0.23
TOP3B-215ENST00000470338 NFIBO00712 420 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 COL6A1P12109 1028 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 NSMFQ6X4W1 530 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 CATIPQ7Z7H3 387 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 MTMR8Q96EF0 704 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 MAP3K14Q99558 947 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 MAF1Q9H063 256 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 ABHD16BQ9H3Z7 469 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 C11orf49Q9H6J7 331 aa16.49■□□□□ 0.23
TOP3B-215ENST00000470338 GPHNQ9NQX3 736 aaPredicted RBP16.49■□□□□ 0.23
TOP3B-215ENST00000470338 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.49■□□□□ 0.23
TOP3B-215ENST00000470338 ASTN1O14525 1302 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 ASB14A6NK59 587 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 SH2B2O14492 632 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-215ENST00000470338 LIFRP42702 1097 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 ACVR2BQ13705 512 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 BAATQ14032 418 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-215ENST00000470338 QRICH1Q2TAL8 776 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 ARMCX2Q7L311 632 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 ARRDC4Q8NCT1 418 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 RGS22Q8NE09 1264 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 DPF3Q92784 378 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 KCNB2Q92953 911 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 RIOX1Q9H6W3 641 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 VAT1LQ9HCJ6 419 aa16.48■□□□□ 0.23
TOP3B-215ENST00000470338 ABCB11O95342 1321 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 DHX16O60231 1041 aaKnown RBP16.47■□□□□ 0.23
TOP3B-215ENST00000470338 AKR1A1P14550 325 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 EXOSC10Q01780 885 aaKnown RBP16.47■□□□□ 0.23
TOP3B-215ENST00000470338 SLC35G1Q2M3R5 365 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 USH1GQ495M9 461 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 ANO1Q5XXA6 986 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 ZNF654Q8IZM8 581 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 NEK1Q96PY6 1258 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 KATNBL1Q9H079 304 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 LRRC37A2A6NM11 1700 aa16.47■□□□□ 0.23
TOP3B-215ENST00000470338 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 PTPDC1A2A3K4 754 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 DNM1LO00429 736 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 DDAH1O94760 285 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 RARBP10826 455 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 KRT32Q14532 448 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
TOP3B-215ENST00000470338 ADCK5Q3MIX3 580 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 RNF207Q6ZRF8 634 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 FBXO11Q86XK2 927 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 PURBQ96QR8 312 aaKnown RBP16.46■□□□□ 0.23
TOP3B-215ENST00000470338 ADD3Q9UEY8 706 aaKnown RBP16.46■□□□□ 0.23
TOP3B-215ENST00000470338 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
TOP3B-215ENST00000470338 ZBTB5O15062 677 aa16.45■□□□□ 0.22
TOP3B-215ENST00000470338 EPB41L2O43491 1005 aaKnown RBP16.45■□□□□ 0.22
TOP3B-215ENST00000470338 CYTH3O43739 400 aa16.45■□□□□ 0.22
TOP3B-215ENST00000470338 REC8O95072 547 aa16.45■□□□□ 0.22
TOP3B-215ENST00000470338 HSPA4P34932 840 aa16.45■□□□□ 0.22
TOP3B-215ENST00000470338 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
TOP3B-215ENST00000470338 LRRC41Q15345 812 aa16.45■□□□□ 0.22
TOP3B-215ENST00000470338 GJC2Q5T442 439 aaPredicted RBP16.45■□□□□ 0.22
TOP3B-215ENST00000470338 SLC30A10Q6XR72 485 aa16.45■□□□□ 0.22
TOP3B-215ENST00000470338 DHX32Q7L7V1 743 aaKnown RBP16.45■□□□□ 0.22
TOP3B-215ENST00000470338 AMNQ9BXJ7 453 aa16.45■□□□□ 0.22
TOP3B-215ENST00000470338 XPNPEP3Q9NQH7 507 aa16.45■□□□□ 0.22
TOP3B-215ENST00000470338 ZHX1Q9UKY1 873 aaPredicted RBP16.45■□□□□ 0.22
TOP3B-215ENST00000470338 MRPL11Q9Y3B7 192 aaKnown RBP16.45■□□□□ 0.22
TOP3B-215ENST00000470338 CCDC69A6NI79 296 aa16.44■□□□□ 0.22
TOP3B-215ENST00000470338 PPP1R11O60927 126 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-215ENST00000470338 DUSP11O75319 330 aaKnown RBP16.44■□□□□ 0.22
TOP3B-215ENST00000470338 SMARCA1P28370 1054 aa16.44■□□□□ 0.22
TOP3B-215ENST00000470338 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-215ENST00000470338 CCDC144BQ3MJ40 725 aa16.44■□□□□ 0.22
TOP3B-215ENST00000470338 NFXL1Q6ZNB6 911 aa16.44■□□□□ 0.22
TOP3B-215ENST00000470338 SGMS1Q86VZ5 419 aa16.44■□□□□ 0.22
TOP3B-215ENST00000470338 NUP133Q8WUM0 1156 aa16.44■□□□□ 0.22
TOP3B-215ENST00000470338 TBC1D5Q92609 795 aa16.44■□□□□ 0.22
TOP3B-215ENST00000470338 MYL10Q9BUA6 226 aa16.44■□□□□ 0.22
TOP3B-215ENST00000470338 LRRC2Q9BYS8 371 aa16.44■□□□□ 0.22
TOP3B-215ENST00000470338 PNMA6FA0A0J9YX94 578 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 KBTBD13C9JR72 458 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 H0YGN5 161 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 ADCY6O43306 1168 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 EVI5O60447 810 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 ADAMTS4O75173 837 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 HMGB1P09429 215 aaKnown RBP16.43■□□□□ 0.22
TOP3B-215ENST00000470338 CALM1P0DP23 149 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 CALM2P0DP24 149 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 CALM3P0DP25 149 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 CALML3P27482 149 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 KIF5BP33176 963 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 MCF2L2Q86YR7 1114 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms