RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 NFIBO00712 420 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 TNPO2O14787 897 aaKnown RBP12.2□□□□□ -0.46
SMC1A-206ENST00000470241 OPLAHO14841 1288 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 JAK2O60674 1132 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 CDKL5O76039 1030 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 FDPSP14324 419 aaKnown RBP12.2□□□□□ -0.46
SMC1A-206ENST00000470241 PTPREP23469 700 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 SSRP1Q08945 709 aaKnown RBP12.2□□□□□ -0.46
SMC1A-206ENST00000470241 KIF22Q14807 665 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 WDR78Q5VTH9 848 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 WWC2Q6AWC2 1192 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 TYW1BQ6NUM6 668 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 GPKOWQ92917 476 aaPredicted RBP eCLIP12.2□□□□□ -0.46
SMC1A-206ENST00000470241 ACAD9Q9H845 621 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
SMC1A-206ENST00000470241 FBXO40Q9UH90 709 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 GJD2Q9UKL4 321 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 PCDHA1Q9Y5I3 950 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 PCNTO95613 3336 aa12.2□□□□□ -0.46
SMC1A-206ENST00000470241 PTPDC1A2A3K4 754 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 DEXIO95424 95 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 SCG2P13521 617 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 AKAP17AQ02040 695 aaKnown RBP12.19□□□□□ -0.46
SMC1A-206ENST00000470241 TRAF1Q13077 416 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 GRB14Q14449 540 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 MORN1Q5T089 497 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 TRIM22Q8IYM9 498 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 SMARCC2Q8TAQ2 1214 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 USP6NLQ92738 828 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 SHISA4Q96DD7 197 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 MMP19Q99542 508 aa12.19□□□□□ -0.46
SMC1A-206ENST00000470241 LLPHQ9BRT6 129 aaKnown RBP12.19□□□□□ -0.46
SMC1A-206ENST00000470241 CWC22Q9HCG8 908 aaKnown RBP12.19□□□□□ -0.46
SMC1A-206ENST00000470241 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
SMC1A-206ENST00000470241 SLC15A5A6NIM6 579 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
SMC1A-206ENST00000470241 STXBP3O00186 592 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 STRNO43815 780 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 FCER1AP12319 257 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 PRKCZQ05513 592 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 CUL4AQ13619 759 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 OTOP1Q7RTM1 612 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 ABRAQ8N0Z2 381 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 RGS22Q8NE09 1264 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 DDX11Q96FC9 970 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 AIFM3Q96NN9 605 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 A1CFQ9NQ94 594 aaKnown RBP12.18□□□□□ -0.46
SMC1A-206ENST00000470241 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 ORC3Q9UBD5 711 aaPredicted RBP12.18□□□□□ -0.46
SMC1A-206ENST00000470241 GABRQQ9UN88 632 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 IVNS1ABPQ9Y6Y0 642 aa12.18□□□□□ -0.46
SMC1A-206ENST00000470241 COL11A1P12107 1806 aaPredicted RBP12.18□□□□□ -0.46
SMC1A-206ENST00000470241 DNAJC25-GNG10A0A024R161 153 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 hCG_1984214I3L0E3 225 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 COBLO75128 1261 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 GNRH1P01148 92 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 PGK2P07205 417 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 ADORA2AP29274 412 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 FLT3LGP49771 235 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 GHRHRQ02643 423 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 MAP2K5Q13163 448 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 BAATQ14032 418 aaPredicted RBP12.17□□□□□ -0.46
SMC1A-206ENST00000470241 KCTD2Q14681 263 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 ARHGEF6Q15052 776 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 PPP1R18Q6NYC8 613 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 NSMFQ6X4W1 530 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 HSCBQ8IWL3 235 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 ANKRD35Q8N283 1001 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 ZNF713Q8N859 430 aaPredicted RBP12.17□□□□□ -0.46
SMC1A-206ENST00000470241 SOCS4Q8WXH5 440 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 NUDT12Q9BQG2 462 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 PRDM10Q9NQV6 1147 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 CYP39A1Q9NYL5 469 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 VPS54Q9P1Q0 977 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 SRRDQ9UH36 339 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 TRIM17Q9Y577 477 aa12.17□□□□□ -0.46
SMC1A-206ENST00000470241 ZSWIM8A7E2V4 1837 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 HOXC6P09630 235 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 HOXD10P28358 340 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 HSD17B4P51659 736 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 NAPAP54920 295 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 RPS6P62753 249 aaKnown RBP12.16□□□□□ -0.46
SMC1A-206ENST00000470241 ZNF792Q3KQV3 632 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 SLC30A10Q6XR72 485 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 RNF207Q6ZRF8 634 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 FAM133AQ8N9E0 248 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 NPLOC4Q8TAT6 608 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 SYTL5Q8TDW5 730 aaPredicted RBP12.16□□□□□ -0.46
SMC1A-206ENST00000470241 FGD4Q96M96 766 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 PURBQ96QR8 312 aaKnown RBP12.16□□□□□ -0.46
SMC1A-206ENST00000470241 MAF1Q9H063 256 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 COL20A1Q9P218 1284 aa12.16□□□□□ -0.46
SMC1A-206ENST00000470241 PFASO15067 1338 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 BAZ2BQ9UIF8 2168 aaKnown RBP12.15□□□□□ -0.46
SMC1A-206ENST00000470241 ESYT2A0FGR8 921 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 SMCO2A6NFE2 343 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms