RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 ZBED6P86452 979 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 TSEN2Q8NCE0 465 aaKnown RBP11.5□□□□□ -0.57
SMC4-210ENST00000469762 ANKRD20A12PQ8NF67 263 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 IPO4Q8TEX9 1081 aaKnown RBP11.5□□□□□ -0.57
SMC4-210ENST00000469762 TRIM47Q96LD4 638 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 SH3GL2Q99962 352 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 MLXIPQ9HAP2 919 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 SNX12Q9UMY4 172 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 PCDHA4Q9UN74 947 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 KRT83P78385 493 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 MMGT1Q8N4V1 131 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 KRT86O43790 486 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 PCP11498 1178 aaKnown RBP11.5□□□□□ -0.57
SMC4-210ENST00000469762 TRHP20396 242 aaPredicted RBP11.5□□□□□ -0.57
SMC4-210ENST00000469762 HNRNPH3P31942 346 aaKnown RBP11.5□□□□□ -0.57
SMC4-210ENST00000469762 IRAK1P51617 712 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 CDK17Q00537 523 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 CCDC170Q8IYT3 715 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 KIAA0895Q8NCT3 520 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 RPGRIP1Q96KN7 1286 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 SEMA6BQ9H3T3 888 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 EXOC5O00471 708 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 IDEP14735 1019 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 VAV2P52735 878 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 MECOMQ03112 1051 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 INF2Q27J81 1249 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 KIAA1328Q86T90 577 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 CSGALNACT2Q8N6G5 542 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 CNOT6LQ96LI5 555 aaKnown RBP11.49□□□□□ -0.57
SMC4-210ENST00000469762 TRIM9Q9C026 710 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 MAD2L2Q9UI95 211 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 SIK3Q9Y2K2 1263 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 TBC1D8BQ0IIM8 1120 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 P2RX5Q93086 422 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 MMTAG2Q9BU76 263 aaKnown RBP11.49□□□□□ -0.57
SMC4-210ENST00000469762 PES1O00541 588 aaKnown RBP11.49□□□□□ -0.57
SMC4-210ENST00000469762 LCA5LO95447 670 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 CPP00450 1065 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 PLCG1P19174 1290 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 SH2D4AQ9H788 454 aa11.49□□□□□ -0.57
SMC4-210ENST00000469762 TRIM21P19474 475 aaKnown RBP11.48□□□□□ -0.57
SMC4-210ENST00000469762 CCNE1P24864 410 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 SLC7A5Q01650 507 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 TXNRD1Q16881 649 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 SLC4A8Q2Y0W8 1093 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 FIGNQ5HY92 759 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 DTHD1Q6ZMT9 781 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 KAT2BQ92831 832 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 DHTKD1Q96HY7 919 aaPredicted RBP11.48□□□□□ -0.57
SMC4-210ENST00000469762 ACBD3Q9H3P7 528 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 FAM184BQ9ULE4 1060 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 PLAGL2Q9UPG8 496 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 ROBO1Q9Y6N7 1651 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 A0A1W2PQJ5 194 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 PSMA7O14818 248 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 CRKLP46109 303 aaKnown RBP11.48□□□□□ -0.57
SMC4-210ENST00000469762 CKAP4Q07065 602 aaKnown RBP11.48□□□□□ -0.57
SMC4-210ENST00000469762 MAP9Q49MG5 647 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 TTMPQ5BVD1 217 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 GPIHBP1Q8IV16 184 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 RETREG2Q8NC44 543 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 SPATA4Q8NEY3 305 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 MOCS3O95396 460 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 PRDX5P30044 214 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 CYLC1P35663 651 aaPredicted RBP11.48□□□□□ -0.57
SMC4-210ENST00000469762 ITPK1Q13572 414 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 HAUS3Q68CZ6 603 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 NFRKBQ6P4R8 1299 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 ARL8AQ96BM9 186 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 JADE2Q9NQC1 790 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 SH3GLB2Q9NR46 395 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 BTG4Q9NY30 223 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 MINPP1Q9UNW1 487 aa11.48□□□□□ -0.57
SMC4-210ENST00000469762 STXBP3O00186 592 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 CXCR5P32302 372 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 SKIDA1Q1XH10 827 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 ASTE1Q2TB18 679 aaPredicted RBP11.47□□□□□ -0.57
SMC4-210ENST00000469762 FBXO33Q7Z6M2 555 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 NIP7Q9Y221 180 aaKnown RBP eCLIP11.47□□□□□ -0.571e-7■■■■■ 83.2
SMC4-210ENST00000469762 NUTM2BA6NNL0 878 aaPredicted RBP11.47□□□□□ -0.57
SMC4-210ENST00000469762 NUTM2EB1AL46 878 aaPredicted RBP11.47□□□□□ -0.57
SMC4-210ENST00000469762 EDIL3O43854 480 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 ADAMTS2O95450 1211 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 MCM3P25205 808 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 ITIH3Q06033 890 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 DAGLBQ8NCG7 672 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 SECISBP2LQ93073 1101 aaKnown RBP11.47□□□□□ -0.57
SMC4-210ENST00000469762 JRKLQ9Y4A0 524 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 PCDHA13Q9Y5I0 950 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 NCK2O43639 380 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 MYL1P05976 194 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 UBE4AQ14139 1066 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 SBK1Q52WX2 424 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 EHBP1Q8NDI1 1231 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 OSBPL9Q96SU4 736 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 C7orf25Q9BPX7 421 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms