RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 WDR19Q8NEZ3 1342 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 CCDC85CA6NKD9 419 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 HOXC6P09630 235 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 PDHBP11177 359 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 PSMA5P28066 241 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 ZNF543Q08ER8 600 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 MAP2K5Q13163 448 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 KCTD2Q14681 263 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 TMEM132BQ14DG7 1078 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 WTAPQ15007 396 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 PROX2Q3B8N5 592 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 MORN1Q5T089 497 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 CATIPQ7Z7H3 387 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 NCAPG2Q86XI2 1143 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 NKX2-3Q8TAU0 364 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 NUP88Q99567 741 aaPredicted RBP10.66□□□□□ -0.7
FN1-216ENST00000469569 APBA2Q99767 749 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 ZBED2Q9BTP6 218 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 FBXO28Q9NVF7 368 aa10.66□□□□□ -0.7
FN1-216ENST00000469569 HMGCRP04035 888 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 PARP1P09874 1014 aaKnown RBP10.65□□□□□ -0.7
FN1-216ENST00000469569 CALM1P0DP23 149 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 CALM2P0DP24 149 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 CALM3P0DP25 149 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 ERCC3P19447 782 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 CTGFP29279 349 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 KIF5BP33176 963 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 LIFRP42702 1097 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 GRB14Q14449 540 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 SEC23AQ15436 765 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 SYDE2Q5VT97 1194 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 MFSD14CQ5VZR4 134 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 SYNE3Q6ZMZ3 975 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 KCTD1Q719H9 257 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 DPP9Q86TI2 863 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 REPS2Q8NFH8 660 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 USP6NLQ92738 828 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 ZNF333Q96JL9 665 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 NEK1Q96PY6 1258 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 ZKSCAN3Q9BRR0 538 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 PORCNQ9H237 461 aa10.65□□□□□ -0.7
FN1-216ENST00000469569 ZNF214Q9UL59 606 aaPredicted RBP10.65□□□□□ -0.7
FN1-216ENST00000469569 DIS3Q9Y2L1 958 aaKnown RBP10.65□□□□□ -0.7
FN1-216ENST00000469569 PRC1O43663 620 aa10.64□□□□□ -0.71
FN1-216ENST00000469569 GNAQP50148 359 aa10.64□□□□□ -0.71
FN1-216ENST00000469569 SNRNP48Q6IEG0 339 aaKnown RBP10.64□□□□□ -0.71
FN1-216ENST00000469569 SKAP1Q86WV1 359 aa10.64□□□□□ -0.71
FN1-216ENST00000469569 MB21D2Q8IYB1 491 aaPredicted RBP10.64□□□□□ -0.71
FN1-216ENST00000469569 MSL3Q8N5Y2 521 aaKnown RBP10.64□□□□□ -0.71
FN1-216ENST00000469569 KCNB2Q92953 911 aa10.64□□□□□ -0.71
FN1-216ENST00000469569 MMP19Q99542 508 aa10.64□□□□□ -0.71
FN1-216ENST00000469569 LZTS2Q9BRK4 669 aa10.64□□□□□ -0.71
FN1-216ENST00000469569 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
FN1-216ENST00000469569 NRBP1Q9UHY1 535 aa10.64□□□□□ -0.71
FN1-216ENST00000469569 PRR12Q9ULL5 1215 aa10.64□□□□□ -0.71
FN1-216ENST00000469569 GABRQQ9UN88 632 aa10.64□□□□□ -0.71
FN1-216ENST00000469569 PFASO15067 1338 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 DDAH1O94760 285 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 ICAM1P05362 532 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 SMARCA1P28370 1054 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 ADORA2AP29274 412 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 HSPA4P34932 840 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
FN1-216ENST00000469569 CAP1Q01518 475 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 PPP2R5BQ15173 497 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 OLFML2BQ68BL8 750 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 NFXL1Q6ZNB6 911 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 CYB5R4Q7L1T6 521 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 DHX32Q7L7V1 743 aaKnown RBP10.63□□□□□ -0.71
FN1-216ENST00000469569 CPXCR1Q8N123 301 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 IGDCC4Q8TDY8 1250 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 DDX11Q96FC9 970 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 RANBP17Q9H2T7 1088 aaKnown RBP10.63□□□□□ -0.71
FN1-216ENST00000469569 ACAD9Q9H845 621 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 SLC24A3Q9HC58 644 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 GPCPD1Q9NPB8 672 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 MTMR7Q9Y216 660 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 MGAMO43451 1857 aa10.63□□□□□ -0.71
FN1-216ENST00000469569 LOC102724159A0A0B4J2E5 919 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 B4DLN1 442 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 MSCO60682 206 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 CYP2B6P20813 491 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 MRPL12P52815 198 aaKnown RBP10.62□□□□□ -0.71
FN1-216ENST00000469569 RCAN1P53805 252 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 FGD1P98174 961 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 PWP2Q15269 919 aaKnown RBP10.62□□□□□ -0.71
FN1-216ENST00000469569 STOX1Q6ZVD7 989 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 ANKRD35Q8N283 1001 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 SAMD3Q8N6K7 520 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 CTCFLQ8NI51 663 aaPredicted RBP10.62□□□□□ -0.71
FN1-216ENST00000469569 MPHOSPH6Q99547 160 aaKnown RBP10.62□□□□□ -0.71
FN1-216ENST00000469569 RAVER2Q9HCJ3 691 aaKnown RBP10.62□□□□□ -0.71
FN1-216ENST00000469569 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
FN1-216ENST00000469569 CCPG1Q9ULG6 757 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 RLFQ13129 1914 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 HTTP42858 3142 aa10.62□□□□□ -0.71
FN1-216ENST00000469569 RPTORQ8N122 1335 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms