RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 NFXL1Q6ZNB6 911 aa15.15■□□□□ 0.02
CLRN1-204ENST00000468836 RNF207Q6ZRF8 634 aa15.15■□□□□ 0.02
CLRN1-204ENST00000468836 NOL8Q76FK4 1167 aaKnown RBP15.15■□□□□ 0.02
CLRN1-204ENST00000468836 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
CLRN1-204ENST00000468836 ADGRF4Q8IZF3 695 aa15.15■□□□□ 0.02
CLRN1-204ENST00000468836 FAM133AQ8N9E0 248 aa15.15■□□□□ 0.02
CLRN1-204ENST00000468836 CPVLQ9H3G5 476 aa15.15■□□□□ 0.02
CLRN1-204ENST00000468836 PDE4DIPQ5VU43 2346 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 CCDC69A6NI79 296 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 KLRF2D3W0D1 207 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 NFIBO00712 420 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 SLC27A2O14975 620 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 PRC1O43663 620 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 SNAI1O95863 264 aaPredicted RBP15.14■□□□□ 0.01
CLRN1-204ENST00000468836 ZNF865P0CJ78 1059 aaPredicted RBP15.14■□□□□ 0.01
CLRN1-204ENST00000468836 MCM5P33992 734 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
CLRN1-204ENST00000468836 BAATQ14032 418 aaPredicted RBP15.14■□□□□ 0.01
CLRN1-204ENST00000468836 STOX1Q6ZVD7 989 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 NUP133Q8WUM0 1156 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 TAF6LQ9Y6J9 622 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 ABCB11O95342 1321 aa15.14■□□□□ 0.01
CLRN1-204ENST00000468836 B4DLN1 442 aa15.13■□□□□ 0.01
CLRN1-204ENST00000468836 COL6A1P12109 1028 aa15.13■□□□□ 0.01
CLRN1-204ENST00000468836 MRPL12P52815 198 aaKnown RBP15.13■□□□□ 0.01
CLRN1-204ENST00000468836 ATN1P54259 1190 aaPredicted RBP15.13■□□□□ 0.01
CLRN1-204ENST00000468836 TRAF1Q13077 416 aa15.13■□□□□ 0.01
CLRN1-204ENST00000468836 LRRC41Q15345 812 aa15.13■□□□□ 0.01
CLRN1-204ENST00000468836 FBXO11Q86XK2 927 aa15.13■□□□□ 0.01
CLRN1-204ENST00000468836 MB21D2Q8IYB1 491 aaPredicted RBP15.13■□□□□ 0.01
CLRN1-204ENST00000468836 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
CLRN1-204ENST00000468836 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
CLRN1-204ENST00000468836 SOWAHBA6NEL2 793 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 PGK1P00558 417 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 KIF5BP33176 963 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 GRM4Q14833 912 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 QRICH1Q2TAL8 776 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 ERICH6BQ5W0A0 696 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 CHRDL2Q6WN34 429 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 SLC30A10Q6XR72 485 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 MCF2L2Q86YR7 1114 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 TMTC2Q8N394 836 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 STAG2Q8N3U4 1231 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 LENG1Q96BZ8 264 aaPredicted RBP15.12■□□□□ 0.01
CLRN1-204ENST00000468836 TMEM87BQ96K49 555 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 PRKAG2Q9UGJ0 569 aa15.12■□□□□ 0.01
CLRN1-204ENST00000468836 MRPL11Q9Y3B7 192 aaKnown RBP15.12■□□□□ 0.01
CLRN1-204ENST00000468836 DUSP11O75319 330 aaKnown RBP15.11■□□□□ 0.01
CLRN1-204ENST00000468836 DDAH1O94760 285 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 ADCYAP1R1P41586 468 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 ALDH5A1P51649 535 aaPredicted RBP15.11■□□□□ 0.01
CLRN1-204ENST00000468836 RPS6P62753 249 aaKnown RBP15.11■□□□□ 0.01
CLRN1-204ENST00000468836 PDE4DQ08499 809 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 CCDC144BQ3MJ40 725 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 SYNE3Q6ZMZ3 975 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 EEPD1Q7L9B9 569 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 FERMT2Q96AC1 680 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 FGD4Q96M96 766 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 MTA3Q9BTC8 594 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 AMNQ9BXJ7 453 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 JMJD4Q9H9V9 463 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 MAD2L2Q9UI95 211 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 ZMYND8Q9ULU4 1186 aaPredicted RBP15.11■□□□□ 0.01
CLRN1-204ENST00000468836 SYNRGQ9UMZ2 1314 aa15.11■□□□□ 0.01
CLRN1-204ENST00000468836 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 ZBTB5O15062 677 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 C6orf222P0C671 652 aaPredicted RBP15.1■□□□□ 0.01
CLRN1-204ENST00000468836 ANTXR2P58335 489 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 TNFAIP2Q03169 654 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 KRT32Q14532 448 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 NECTIN1Q15223 517 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
CLRN1-204ENST00000468836 LRRC26Q2I0M4 334 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 FBXO16Q8IX29 292 aaPredicted RBP15.1■□□□□ 0.01
CLRN1-204ENST00000468836 ZNF654Q8IZM8 581 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 CLEC4DQ8WXI8 215 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 NEK1Q96PY6 1258 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 VTA1Q9NP79 307 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 ATP11BQ9Y2G3 1177 aa15.1■□□□□ 0.01
CLRN1-204ENST00000468836 PALM3A6NDB9 673 aaPredicted RBP15.09■□□□□ 0.01
CLRN1-204ENST00000468836 SH2B2O14492 632 aaPredicted RBP15.09■□□□□ 0.01
CLRN1-204ENST00000468836 REC8O95072 547 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 CALM1P0DP23 149 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 CALM2P0DP24 149 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 CALM3P0DP25 149 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 SYN1P17600 705 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 RTP1P59025 263 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 FGD1P98174 961 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 PCSK9Q8NBP7 692 aaKnown RBP15.09■□□□□ 0.01
CLRN1-204ENST00000468836 DNERQ8NFT8 737 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 IGDCC4Q8TDY8 1250 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 VTI1AQ96AJ9 217 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 PURBQ96QR8 312 aaKnown RBP15.09■□□□□ 0.01
CLRN1-204ENST00000468836 MAF1Q9H063 256 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 AP5M1Q9H0R1 490 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 LY9Q9HBG7 655 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 SENP2Q9HC62 589 aa15.09■□□□□ 0.01
CLRN1-204ENST00000468836 SEC63Q9UGP8 760 aaKnown RBP15.09■□□□□ 0.01
CLRN1-204ENST00000468836 COLQQ9Y215 455 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms