RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SOWAHBA6NEL2 793 aa22.36■■□□□ 1.17
COL7A1-207ENST00000467985 NSMFQ6X4W1 530 aa22.36■■□□□ 1.17
COL7A1-207ENST00000467985 ENAHQ8N8S7 591 aaPredicted RBP22.36■■□□□ 1.17
COL7A1-207ENST00000467985 LENG1Q96BZ8 264 aaPredicted RBP22.36■■□□□ 1.17
COL7A1-207ENST00000467985 LBHD1Q9BQE6 289 aaPredicted RBP22.36■■□□□ 1.17
COL7A1-207ENST00000467985 UBAC1Q9BSL1 405 aa22.36■■□□□ 1.17
COL7A1-207ENST00000467985 UBE2OQ9C0C9 1292 aaKnown RBP22.36■■□□□ 1.17
COL7A1-207ENST00000467985 IL25Q9H293 177 aa22.36■■□□□ 1.17
COL7A1-207ENST00000467985 ADD3Q9UEY8 706 aaKnown RBP22.36■■□□□ 1.17
COL7A1-207ENST00000467985 WDR19Q8NEZ3 1342 aa22.35■■□□□ 1.17
COL7A1-207ENST00000467985 MOXD2PA6NHM9 499 aa22.35■■□□□ 1.17
COL7A1-207ENST00000467985 NUP133Q8WUM0 1156 aa22.35■■□□□ 1.17
COL7A1-207ENST00000467985 KATNBL1Q9H079 304 aa22.35■■□□□ 1.17
COL7A1-207ENST00000467985 U3KPZ7 1027 aaPredicted RBP22.35■■□□□ 1.17
COL7A1-207ENST00000467985 TNKSO95271 1327 aa22.34■■□□□ 1.17
COL7A1-207ENST00000467985 LOC102724159A0A0B4J2E5 919 aa22.34■■□□□ 1.17
COL7A1-207ENST00000467985 A0A1W2PQ45 241 aaPredicted RBP22.34■■□□□ 1.17
COL7A1-207ENST00000467985 A0A1W2PQY0 241 aa22.34■■□□□ 1.17
COL7A1-207ENST00000467985 CST5P28325 142 aaPredicted RBP22.34■■□□□ 1.17
COL7A1-207ENST00000467985 ACLYP53396 1101 aa22.34■■□□□ 1.17
COL7A1-207ENST00000467985 TRDNQ13061 729 aa22.34■■□□□ 1.17
COL7A1-207ENST00000467985 PWP2Q15269 919 aaKnown RBP22.34■■□□□ 1.17
COL7A1-207ENST00000467985 TRIM60Q495X7 471 aa22.34■■□□□ 1.17
COL7A1-207ENST00000467985 ASPRV1Q53RT3 343 aa22.34■■□□□ 1.17
COL7A1-207ENST00000467985 TDHQ8IZJ6 230 aa22.34■■□□□ 1.17
COL7A1-207ENST00000467985 PCSK9Q8NBP7 692 aaKnown RBP22.34■■□□□ 1.17
COL7A1-207ENST00000467985 KLHDC9Q8NEP7 349 aa22.34■■□□□ 1.17
COL7A1-207ENST00000467985 UPF3AQ9H1J1 476 aaKnown RBP22.34■■□□□ 1.17
COL7A1-207ENST00000467985 C6orf222P0C671 652 aaPredicted RBP22.33■■□□□ 1.17
COL7A1-207ENST00000467985 GJA9P57773 515 aa22.33■■□□□ 1.17
COL7A1-207ENST00000467985 SGSM2O43147 1006 aa22.32■■□□□ 1.16
COL7A1-207ENST00000467985 GOLGA8HP0CJ92 632 aa22.32■■□□□ 1.16
COL7A1-207ENST00000467985 MDM2Q00987 491 aaPredicted RBP22.32■■□□□ 1.16
COL7A1-207ENST00000467985 TNFAIP2Q03169 654 aa22.32■■□□□ 1.16
COL7A1-207ENST00000467985 BAATQ14032 418 aaPredicted RBP22.32■■□□□ 1.16
COL7A1-207ENST00000467985 KCNA10Q16322 511 aa22.32■■□□□ 1.16
COL7A1-207ENST00000467985 IFIT1BQ5T764 474 aaKnown RBP22.32■■□□□ 1.16
COL7A1-207ENST00000467985 MORC4Q8TE76 937 aa22.32■■□□□ 1.16
COL7A1-207ENST00000467985 MAF1Q9H063 256 aa22.32■■□□□ 1.16
COL7A1-207ENST00000467985 PTPDC1A2A3K4 754 aa22.31■■□□□ 1.16
COL7A1-207ENST00000467985 NFIBO00712 420 aa22.31■■□□□ 1.16
COL7A1-207ENST00000467985 PARP1P09874 1014 aaKnown RBP22.31■■□□□ 1.16
COL7A1-207ENST00000467985 CCSAPQ6IQ19 270 aaPredicted RBP22.31■■□□□ 1.16
COL7A1-207ENST00000467985 RNF207Q6ZRF8 634 aa22.31■■□□□ 1.16
COL7A1-207ENST00000467985 MPHOSPH6Q99547 160 aaKnown RBP22.31■■□□□ 1.16
COL7A1-207ENST00000467985 VTA1Q9NP79 307 aa22.31■■□□□ 1.16
COL7A1-207ENST00000467985 STARD7Q9NQZ5 370 aa22.31■■□□□ 1.16
COL7A1-207ENST00000467985 ASTN1O14525 1302 aa22.31■■□□□ 1.16
COL7A1-207ENST00000467985 ADCY6O43306 1168 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 NKX3-2P78367 333 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 PTH1RQ03431 593 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 TLE2Q04725 743 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 LRIT3Q3SXY7 679 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 GNASQ5JWF2 1037 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 IQSEC1Q6DN90 963 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 NOL8Q76FK4 1167 aaKnown RBP22.3■■□□□ 1.16
COL7A1-207ENST00000467985 RGS22Q8NE09 1264 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 CLEC4DQ8WXI8 215 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 GLT1D1Q96MS3 346 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 UBA5Q9GZZ9 404 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 PRDM5Q9NQX1 630 aaPredicted RBP22.3■■□□□ 1.16
COL7A1-207ENST00000467985 ELP1O95163 1332 aa22.3■■□□□ 1.16
COL7A1-207ENST00000467985 LRRC37A2A6NM11 1700 aa22.29■■□□□ 1.16
COL7A1-207ENST00000467985 CYP21A2P08686 494 aa22.29■■□□□ 1.16
COL7A1-207ENST00000467985 TOX2Q96NM4 488 aa22.29■■□□□ 1.16
COL7A1-207ENST00000467985 PDLIM7Q9NR12 457 aa22.29■■□□□ 1.16
COL7A1-207ENST00000467985 LCTP09848 1927 aa22.29■■□□□ 1.16
COL7A1-207ENST00000467985 MYADML2A6NDP7 307 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 B4DLN1 442 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 ASGR1P07306 291 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 CALML3P27482 149 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 ALDH5A1P51649 535 aaPredicted RBP22.28■■□□□ 1.16
COL7A1-207ENST00000467985 MRPL12P52815 198 aaKnown RBP22.28■■□□□ 1.16
COL7A1-207ENST00000467985 SEC23AQ15436 765 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 CDC37Q16543 378 aaPredicted RBP22.28■■□□□ 1.16
COL7A1-207ENST00000467985 GPR153Q6NV75 609 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 ANKRD33Q7Z3H0 272 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 RALYLQ86SE5 291 aaKnown RBP22.28■■□□□ 1.16
COL7A1-207ENST00000467985 ADGRF4Q8IZF3 695 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 AP5M1Q9H0R1 490 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 Q9Y3F1 56 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 LTBP2Q14767 1821 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 ABCB11O95342 1321 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 MROH7Q68CQ1 1323 aa22.28■■□□□ 1.16
COL7A1-207ENST00000467985 ERICH2A1L162 156 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 DCDC2CA8MYV0 355 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 PQBP1O60828 265 aaKnown RBP22.27■■□□□ 1.16
COL7A1-207ENST00000467985 CLTBP09497 229 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 RPS6P62753 249 aaKnown RBP22.27■■□□□ 1.16
COL7A1-207ENST00000467985 SART3Q15020 963 aaKnown RBP22.27■■□□□ 1.16
COL7A1-207ENST00000467985 USH1GQ495M9 461 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 TAPT1Q6NXT6 567 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 SLC30A10Q6XR72 485 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 CYB5R4Q7L1T6 521 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 TLK2Q86UE8 772 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 DNERQ8NFT8 737 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 MAP4K1Q92918 833 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 CPVLQ9H3G5 476 aa22.27■■□□□ 1.16
COL7A1-207ENST00000467985 GNEQ9Y223 722 aaKnown RBP22.27■■□□□ 1.16
COL7A1-207ENST00000467985 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms