RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 BRF1Q92994 677 aa15.82■□□□□ 0.12
SSBP1-206ENST00000467681 COL11A1P12107 1806 aaPredicted RBP15.82■□□□□ 0.12
SSBP1-206ENST00000467681 PNMA6FA0A0J9YX94 578 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 KLF18A0A0U1RQI7 1052 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 APOBRQ0VD83 1088 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 TRIM32Q13049 653 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 PPP2R5BQ15173 497 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 MTFR1Q15390 333 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 MAP3K21Q5TCX8 1036 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 MICU3Q86XE3 530 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 CCDC144CPQ8IYA2 1237 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 PIGSQ96S52 555 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 SPZ1Q9BXG8 430 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 AMNQ9BXJ7 453 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 UPF3BQ9BZI7 483 aaKnown RBP15.81■□□□□ 0.12
SSBP1-206ENST00000467681 MAF1Q9H063 256 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 A1CFQ9NQ94 594 aaKnown RBP15.81■□□□□ 0.12
SSBP1-206ENST00000467681 FAM217BQ9NTX9 383 aaPredicted RBP15.81■□□□□ 0.12
SSBP1-206ENST00000467681 PDRG1Q9NUG6 133 aa15.81■□□□□ 0.12
SSBP1-206ENST00000467681 ZNFX1Q9P2E3 1918 aaKnown RBP15.81■□□□□ 0.12
SSBP1-206ENST00000467681 PLEKHA8P1O95397 391 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 MYCP01106 439 aaPredicted RBP15.8■□□□□ 0.12
SSBP1-206ENST00000467681 CCL5P13501 91 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 TRAF1Q13077 416 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 RTN1Q16799 776 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 TMTC3Q6ZXV5 915 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 FAM133AQ8N9E0 248 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 MAML3Q96JK9 1138 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 UNC93B1Q9H1C4 597 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 ALDH8A1Q9H2A2 487 aaPredicted RBP15.8■□□□□ 0.12
SSBP1-206ENST00000467681 RBM28Q9NW13 759 aaKnown RBP15.8■□□□□ 0.12
SSBP1-206ENST00000467681 CYP39A1Q9NYL5 469 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 MRPL11Q9Y3B7 192 aaKnown RBP15.8■□□□□ 0.12
SSBP1-206ENST00000467681 PLXNB2O15031 1838 aa15.8■□□□□ 0.12
SSBP1-206ENST00000467681 PFASO15067 1338 aa15.79■□□□□ 0.12
SSBP1-206ENST00000467681 ABCB11O95342 1321 aa15.79■□□□□ 0.12
SSBP1-206ENST00000467681 RPTORQ8N122 1335 aa15.79■□□□□ 0.12
SSBP1-206ENST00000467681 POTEB2H3BUK9 544 aa15.79■□□□□ 0.12
SSBP1-206ENST00000467681 NFIBO00712 420 aa15.79■□□□□ 0.12
SSBP1-206ENST00000467681 PPP1R11O60927 126 aaPredicted RBP15.79■□□□□ 0.12
SSBP1-206ENST00000467681 CACNB2Q08289 660 aaPredicted RBP15.79■□□□□ 0.12
SSBP1-206ENST00000467681 BAATQ14032 418 aaPredicted RBP15.79■□□□□ 0.12
SSBP1-206ENST00000467681 TOB2Q14106 344 aaPredicted RBP15.79■□□□□ 0.12
SSBP1-206ENST00000467681 USH1GQ495M9 461 aa15.79■□□□□ 0.12
SSBP1-206ENST00000467681 NSMFQ6X4W1 530 aa15.79■□□□□ 0.12
SSBP1-206ENST00000467681 ZNF467Q7Z7K2 595 aaPredicted RBP15.79■□□□□ 0.12
SSBP1-206ENST00000467681 MSL3Q8N5Y2 521 aaKnown RBP15.79■□□□□ 0.12
SSBP1-206ENST00000467681 RRP36Q96EU6 259 aaKnown RBP15.79■□□□□ 0.12
SSBP1-206ENST00000467681 RNF208Q9H0X6 261 aa15.79■□□□□ 0.12
SSBP1-206ENST00000467681 PCDHA1Q9Y5I3 950 aa15.79■□□□□ 0.12
SSBP1-206ENST00000467681 CCDC196A0A1B0GTZ2 297 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 GJB1P08034 283 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
SSBP1-206ENST00000467681 PDIA3P30101 505 aaKnown RBP15.78■□□□□ 0.12
SSBP1-206ENST00000467681 CYP2C19P33261 490 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 CNTN2Q02246 1040 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 FUT2Q10981 343 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 MAMDC4Q6UXC1 1216 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 RNF207Q6ZRF8 634 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 HOMER1Q86YM7 354 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 MCF2L2Q86YR7 1114 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 CMTR1Q8N1G2 835 aaKnown RBP15.78■□□□□ 0.12
SSBP1-206ENST00000467681 PIBF1Q8WXW3 757 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 TBC1D5Q92609 795 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 ZNF274Q96GC6 653 aaPredicted RBP15.78■□□□□ 0.12
SSBP1-206ENST00000467681 FGD4Q96M96 766 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 TINF2Q9BSI4 451 aa15.78■□□□□ 0.12
SSBP1-206ENST00000467681 HMX1Q9NP08 348 aaPredicted RBP15.78■□□□□ 0.12
SSBP1-206ENST00000467681 NAP1L2Q9ULW6 460 aaPredicted RBP15.78■□□□□ 0.12
SSBP1-206ENST00000467681 SOWAHBA6NEL2 793 aa15.77■□□□□ 0.12
SSBP1-206ENST00000467681 GOLGA8AA7E2F4 631 aa15.77■□□□□ 0.12
SSBP1-206ENST00000467681 GOLGA8BA8MQT2 603 aa15.77■□□□□ 0.12
SSBP1-206ENST00000467681 CDC27P30260 824 aa15.77■□□□□ 0.12
SSBP1-206ENST00000467681 ADD1P35611 737 aaKnown RBP15.77■□□□□ 0.12
SSBP1-206ENST00000467681 IFFO2Q5TF58 517 aa15.77■□□□□ 0.12
SSBP1-206ENST00000467681 CCDC82Q8N4S0 544 aa15.77■□□□□ 0.12
SSBP1-206ENST00000467681 C22orf23Q9BZE7 217 aa15.77■□□□□ 0.12
SSBP1-206ENST00000467681 PAK6Q9NQU5 681 aaPredicted RBP15.77■□□□□ 0.12
SSBP1-206ENST00000467681 NRBP1Q9UHY1 535 aa15.77■□□□□ 0.12
SSBP1-206ENST00000467681 V9GY48 417 aaPredicted RBP15.77■□□□□ 0.12
SSBP1-206ENST00000467681 PTPDC1A2A3K4 754 aa15.76■□□□□ 0.11
SSBP1-206ENST00000467681 POTEFA5A3E0 1075 aa15.76■□□□□ 0.11
SSBP1-206ENST00000467681 CAPN15O75808 1086 aa15.76■□□□□ 0.11
SSBP1-206ENST00000467681 SNAI1O95863 264 aaPredicted RBP15.76■□□□□ 0.11
SSBP1-206ENST00000467681 METAP2P50579 478 aaKnown RBP eCLIP15.76■□□□□ 0.11
SSBP1-206ENST00000467681 RPS6P62753 249 aaKnown RBP15.76■□□□□ 0.11
SSBP1-206ENST00000467681 PRAMEF19Q5SWL8 479 aa15.76■□□□□ 0.11
SSBP1-206ENST00000467681 SAMD3Q8N6K7 520 aa15.76■□□□□ 0.11
SSBP1-206ENST00000467681 TRPV1Q8NER1 839 aa15.76■□□□□ 0.11
SSBP1-206ENST00000467681 LARP6Q9BRS8 491 aaKnown RBP15.76■□□□□ 0.11
SSBP1-206ENST00000467681 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.76■□□□□ 0.11
SSBP1-206ENST00000467681 ASB14A6NK59 587 aa15.75■□□□□ 0.11
SSBP1-206ENST00000467681 OPLAHO14841 1288 aa15.75■□□□□ 0.11
SSBP1-206ENST00000467681 SGPL1O95470 568 aa15.75■□□□□ 0.11
SSBP1-206ENST00000467681 CALML3P27482 149 aa15.75■□□□□ 0.11
SSBP1-206ENST00000467681 CCND3P30281 292 aaPredicted RBP15.75■□□□□ 0.11
SSBP1-206ENST00000467681 RBM25P49756 843 aaKnown RBP15.75■□□□□ 0.11
SSBP1-206ENST00000467681 NEK4P51957 841 aa15.75■□□□□ 0.11
SSBP1-206ENST00000467681 SOX10P56693 466 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms