RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CCDC12Q8WUD4 166 aaPredicted RBP17■□□□□ 0.31
DDX56-208ENST00000467318 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
DDX56-208ENST00000467318 SH3GLB2Q9NR46 395 aa17■□□□□ 0.31
DDX56-208ENST00000467318 BARHL2Q9NY43 387 aa17■□□□□ 0.31
DDX56-208ENST00000467318 A0A0G2JMZ2 1700 aa17■□□□□ 0.31
DDX56-208ENST00000467318 PPP1R11O60927 126 aaPredicted RBP16.99■□□□□ 0.31
DDX56-208ENST00000467318 GJB2P29033 226 aa16.99■□□□□ 0.31
DDX56-208ENST00000467318 HEATR3Q7Z4Q2 680 aa16.99■□□□□ 0.31
DDX56-208ENST00000467318 R3HDMLQ9H3Y0 253 aa16.99■□□□□ 0.31
DDX56-208ENST00000467318 CWC22Q9HCG8 908 aaKnown RBP16.99■□□□□ 0.31
DDX56-208ENST00000467318 MRPL11Q9Y3B7 192 aaKnown RBP16.99■□□□□ 0.31
DDX56-208ENST00000467318 ABCB11O95342 1321 aa16.99■□□□□ 0.31
DDX56-208ENST00000467318 MYH6P13533 1939 aa16.99■□□□□ 0.31
DDX56-208ENST00000467318 GOLGA6L22H0YM25 854 aa16.98■□□□□ 0.31
DDX56-208ENST00000467318 Q3C1V9 767 aa16.98■□□□□ 0.31
DDX56-208ENST00000467318 USH1GQ495M9 461 aa16.98■□□□□ 0.31
DDX56-208ENST00000467318 WWC2Q6AWC2 1192 aa16.98■□□□□ 0.31
DDX56-208ENST00000467318 SHCBP1Q8NEM2 672 aa16.98■□□□□ 0.31
DDX56-208ENST00000467318 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
DDX56-208ENST00000467318 CPA4Q9UI42 421 aa16.98■□□□□ 0.31
DDX56-208ENST00000467318 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
DDX56-208ENST00000467318 GOLGA6L3A6NEY3 463 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 ALAS1P13196 640 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 TAL1P17542 331 aaPredicted RBP16.97■□□□□ 0.31
DDX56-208ENST00000467318 NUCB2P80303 420 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 PPP1R18Q6NYC8 613 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 TEX2Q8IWB9 1127 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 CHST13Q8NET6 341 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 CCDC148Q8NFR7 591 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 COA7Q96BR5 231 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 TRERF1Q96PN7 1200 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 MOV10L1Q9BXT6 1211 aaKnown RBP16.97■□□□□ 0.31
DDX56-208ENST00000467318 MAF1Q9H063 256 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 MROH8Q9H579 483 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 FBXO40Q9UH90 709 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 STXBP3O00186 592 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 CLEC17AQ6ZS10 378 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 CCAR1Q8IX12 1150 aaKnown RBP16.97■□□□□ 0.31
DDX56-208ENST00000467318 RGS22Q8NE09 1264 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.315e-7■■■■■ 43.5
DDX56-208ENST00000467318 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
DDX56-208ENST00000467318 GLT8D2Q9H1C3 349 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 RIPK3Q9Y572 518 aa16.97■□□□□ 0.31
DDX56-208ENST00000467318 TBC1D8O95759 1140 aa16.96■□□□□ 0.31
DDX56-208ENST00000467318 PDIA4P13667 645 aaKnown RBP16.96■□□□□ 0.31
DDX56-208ENST00000467318 PDCP20941 246 aa16.96■□□□□ 0.31
DDX56-208ENST00000467318 NAPAP54920 295 aa16.96■□□□□ 0.31
DDX56-208ENST00000467318 TRIM29Q14134 588 aa16.96■□□□□ 0.31
DDX56-208ENST00000467318 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
DDX56-208ENST00000467318 NCAPG2Q86XI2 1143 aa16.96■□□□□ 0.31
DDX56-208ENST00000467318 MCF2L2Q86YR7 1114 aa16.96■□□□□ 0.31
DDX56-208ENST00000467318 SAMD3Q8N6K7 520 aa16.96■□□□□ 0.31
DDX56-208ENST00000467318 WBP1LQ9NX94 342 aa16.96■□□□□ 0.31
DDX56-208ENST00000467318 ESYT2A0FGR8 921 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 ERCC3P19447 782 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 GNA11P29992 359 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 MAPK4P31152 587 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 GALNT17Q6IS24 598 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 C8orf76Q96K31 380 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 AIFM3Q96NN9 605 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 ZMYND12Q9H0C1 365 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 ACAD9Q9H845 621 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 RNF146Q9NTX7 359 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 MAP3K20Q9NYL2 800 aaKnown RBP16.95■□□□□ 0.3
DDX56-208ENST00000467318 VPS54Q9P1Q0 977 aa16.95■□□□□ 0.3
DDX56-208ENST00000467318 ECM2O94769 699 aaPredicted RBP16.94■□□□□ 0.3
DDX56-208ENST00000467318 CALML3P27482 149 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 LARP1BQ659C4 914 aaKnown RBP16.94■□□□□ 0.3
DDX56-208ENST00000467318 TYW1BQ6NUM6 668 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.94■□□□□ 0.3
DDX56-208ENST00000467318 JMYQ8N9B5 988 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 PSTPIP2Q9H939 334 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 HOMER2Q9NSB8 354 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 TSKSQ9UJT2 592 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 SMCO2A6NFE2 343 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 STRNO43815 780 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 MRPL12P52815 198 aaKnown RBP16.94■□□□□ 0.3
DDX56-208ENST00000467318 NLRP5P59047 1200 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 SP3Q02447 781 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 FBXO18Q8NFZ0 1043 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 BICD2Q8TD16 824 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 CLEC4DQ8WXI8 215 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 CUL5Q93034 780 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 PORCNQ9H237 461 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 C6orf50Q9HD87 102 aa16.94■□□□□ 0.3
DDX56-208ENST00000467318 FSD2A1L4K1 749 aa16.93■□□□□ 0.3
DDX56-208ENST00000467318 MUM1L1Q5H9M0 696 aa16.93■□□□□ 0.3
DDX56-208ENST00000467318 PHF20Q9BVI0 1012 aa16.93■□□□□ 0.3
DDX56-208ENST00000467318 EFCC1Q9HA90 598 aa16.93■□□□□ 0.3
DDX56-208ENST00000467318 RIC8AQ9NPQ8 531 aa16.93■□□□□ 0.3
DDX56-208ENST00000467318 IVNS1ABPQ9Y6Y0 642 aa16.93■□□□□ 0.3
DDX56-208ENST00000467318 SMCHD1A6NHR9 2005 aa16.93■□□□□ 0.3
DDX56-208ENST00000467318 GPR25O00155 361 aa16.92■□□□□ 0.3
DDX56-208ENST00000467318 PIK3CDO00329 1044 aa16.92■□□□□ 0.3
DDX56-208ENST00000467318 NFIBO00712 420 aa16.92■□□□□ 0.3
DDX56-208ENST00000467318 OPLAHO14841 1288 aa16.92■□□□□ 0.3
DDX56-208ENST00000467318 GHRHRQ02643 423 aa16.92■□□□□ 0.3
DDX56-208ENST00000467318 WDR78Q5VTH9 848 aa16.92■□□□□ 0.3
DDX56-208ENST00000467318 ABRAQ8N0Z2 381 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms