RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 TMEFF2Q9UIK5 374 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-209ENST00000467124 DNAJC25-GNG10A0A024R161 153 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 FAM83GA6ND36 823 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 FAM155AB1AL88 458 aaPredicted RBP5.69□□□□□ -1.5
VPS13A-209ENST00000467124 KCNQ2O43526 872 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 FKTNO75072 461 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 PARNO95453 639 aaKnown RBP5.69□□□□□ -1.5
VPS13A-209ENST00000467124 CRTAMO95727 393 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 ITGB2P05107 769 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 THBDP07204 575 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 PDGFRBP09619 1106 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 JMJD7P0C870 316 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 SRFP11831 508 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 OXCT1P55809 520 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 CWF19L1Q69YN2 538 aaKnown RBP5.69□□□□□ -1.5
VPS13A-209ENST00000467124 PKN3Q6P5Z2 889 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 ARHGAP27Q6ZUM4 889 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 PPIL6Q8IXY8 311 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 RAVER1Q8IY67 606 aaKnown RBP5.69□□□□□ -1.5
VPS13A-209ENST00000467124 DDX1Q92499 740 aaKnown RBP5.69□□□□□ -1.5
VPS13A-209ENST00000467124 C1orf159Q96HA4 380 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 HDAC8Q9BY41 377 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 IRF2BPLQ9H1B7 796 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 MAGEC2Q9UBF1 373 aaPredicted RBP5.69□□□□□ -1.5
VPS13A-209ENST00000467124 SNX11Q9Y5W9 270 aa5.69□□□□□ -1.5
VPS13A-209ENST00000467124 PROCP04070 461 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 LCP1P13796 627 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 HOXC12P31275 282 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 GABREP78334 506 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 SEPT7Q16181 437 aaKnown RBP5.68□□□□□ -1.5
VPS13A-209ENST00000467124 IFI16Q16666 785 aaKnown RBP5.68□□□□□ -1.5
VPS13A-209ENST00000467124 BRDTQ58F21 947 aaPredicted RBP5.68□□□□□ -1.5
VPS13A-209ENST00000467124 NKAPLQ5M9Q1 402 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 SLC35F1Q5T1Q4 408 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 NOL8Q76FK4 1167 aaKnown RBP5.68□□□□□ -1.5
VPS13A-209ENST00000467124 KREMEN2Q8NCW0 462 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 GSTCDQ8NEC7 633 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 SHKBP1Q8TBC3 707 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 JDP2Q8WYK2 163 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 PHF20Q9BVI0 1012 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 CYP26B1Q9NR63 512 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 CLEC1BQ9P126 229 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 PCDHA8Q9Y5H6 950 aa5.68□□□□□ -1.5
VPS13A-209ENST00000467124 TMEM265A0A087WTH1 108 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 C2orf71A6NGG8 1288 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 H3BS24 57 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 ARNTLO00327 626 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 MSTNO14793 375 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 MSCO60682 206 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 KATNA1O75449 491 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 CPP00450 1065 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 SCG5P05408 212 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 GSTM1P09488 218 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 SRGAP2CP0DJJ0 459 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 PLS3P13797 630 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 FOSL1P15407 271 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 BMP8BP34820 402 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 POU4F1Q01851 419 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 GUCY1A3Q02108 690 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 MAP4K2Q12851 820 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 TRIM61Q5EBN2 209 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 PIK3R6Q5UE93 754 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 ZPBP2Q6X784 338 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 DDX46Q7L014 1031 aaKnown RBP5.67□□□□□ -1.5
VPS13A-209ENST00000467124 TMPRSS7Q7RTY8 843 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
VPS13A-209ENST00000467124 SPACA3Q8IXA5 215 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 NETO1Q8TDF5 533 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 FRS2Q8WU20 508 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 PTPRN2Q92932 1015 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 TCTN2Q96GX1 697 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 MAGEB10Q96LZ2 347 aaPredicted RBP5.67□□□□□ -1.5
VPS13A-209ENST00000467124 FCRL3Q96P31 734 aaPredicted RBP5.67□□□□□ -1.5
VPS13A-209ENST00000467124 SMAD5Q99717 465 aaKnown RBP5.67□□□□□ -1.5
VPS13A-209ENST00000467124 SPOCK3Q9BQ16 436 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 MTFR1LQ9H019 292 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 METTL14Q9HCE5 456 aaKnown RBP5.67□□□□□ -1.5
VPS13A-209ENST00000467124 LRRC4CQ9HCJ2 640 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 PIM2Q9P1W9 311 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 ST14Q9Y5Y6 855 aa5.67□□□□□ -1.5
VPS13A-209ENST00000467124 TCRBV16S1A1N1A0A5B0 115 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 WDR64B1ANS9 1081 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 AURKAO14965 403 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 DYRK3O43781 588 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 SYPP08247 313 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 ID4P47928 161 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 NKPD1Q17RQ9 610 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 RSPO4Q2I0M5 234 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-209ENST00000467124 CFAP100Q494V2 611 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 ODR4Q5SWX8 454 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 CDCA2Q69YH5 1023 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-209ENST00000467124 ABHD17CQ6PCB6 329 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 TSPYL5Q86VY4 417 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-209ENST00000467124 ZDHHC13Q8IUH4 622 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 CCDC103Q8IW40 242 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 AFAP1L2Q8N4X5 818 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 MISP3Q96FF7 219 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 FOXP3Q9BZS1 431 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 DUSP15Q9H1R2 295 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-209ENST00000467124 ZSWIM5Q9P217 1185 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms