RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 CYP2B6P20813 491 aa16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 ADORA2AP29274 412 aa16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 FUT2Q10981 343 aa16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 STK3Q13188 491 aa16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 IRF5Q13568 498 aa16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 USP6NLQ92738 828 aa16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 MCOLN1Q9GZU1 580 aa16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 SLKQ9H2G2 1235 aaPredicted RBP16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 NCOA5Q9HCD5 579 aaKnown RBP16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 SEC63Q9UGP8 760 aaKnown RBP16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 DOCK3Q8IZD9 2030 aa16.75■□□□□ 0.27
DNMT3A-208ENST00000466601 ABCB11O95342 1321 aa16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 CNTNAP5Q8WYK1 1306 aa16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 PPP1R11O60927 126 aaPredicted RBP16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 RGS2P41220 211 aa16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 TRAF1Q13077 416 aa16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 DPP9Q86TI2 863 aa16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 ANKRD35Q8N283 1001 aa16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 IL27Q8NEV9 243 aa16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 CLEC4DQ8WXI8 215 aa16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 DDX11Q96FC9 970 aa16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 BAZ2BQ9UIF8 2168 aaKnown RBP16.74■□□□□ 0.27
DNMT3A-208ENST00000466601 hCG_1642624A0A1W2PR95 340 aa16.73■□□□□ 0.27
DNMT3A-208ENST00000466601 PFKFB2O60825 505 aa16.73■□□□□ 0.27
DNMT3A-208ENST00000466601 COBLO75128 1261 aa16.73■□□□□ 0.27
DNMT3A-208ENST00000466601 A1CFQ9NQ94 594 aaKnown RBP16.73■□□□□ 0.27
DNMT3A-208ENST00000466601 MRPL11Q9Y3B7 192 aaKnown RBP16.73■□□□□ 0.27
DNMT3A-208ENST00000466601 PCDHA1Q9Y5I3 950 aa16.73■□□□□ 0.27
DNMT3A-208ENST00000466601 V9GY48 417 aaPredicted RBP16.73■□□□□ 0.27
DNMT3A-208ENST00000466601 PLXNB2O15031 1838 aa16.73■□□□□ 0.27
DNMT3A-208ENST00000466601 SMCHD1A6NHR9 2005 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 NFIBO00712 420 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 CPLX1O14810 134 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 ADCY3O60266 1144 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 ST18O60284 1047 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 PGK2P07205 417 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 HOXC6P09630 235 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 XRCC5P13010 732 aaKnown RBP16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 IFNAR1P17181 557 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 SCRN1Q12765 414 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 NTRK3Q16288 839 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 ME3Q16798 604 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 NSMFQ6X4W1 530 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 NPLOC4Q8TAT6 608 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 APBA2Q99767 749 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 SLC5A4Q9NY91 659 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 LIMCH1Q9UPQ0 1083 aa16.72■□□□□ 0.27
DNMT3A-208ENST00000466601 DNAJC25-GNG10A0A024R161 153 aa16.71■□□□□ 0.27
DNMT3A-208ENST00000466601 LARGE1O95461 756 aa16.71■□□□□ 0.27
DNMT3A-208ENST00000466601 GRK4P32298 578 aa16.71■□□□□ 0.27
DNMT3A-208ENST00000466601 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-208ENST00000466601 PXYLP1Q8TE99 480 aa16.71■□□□□ 0.27
DNMT3A-208ENST00000466601 CYP39A1Q9NYL5 469 aa16.71■□□□□ 0.27
DNMT3A-208ENST00000466601 PFASO15067 1338 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 MYH6P13533 1939 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 PRPF3O43395 683 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 ELNP15502 786 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 AKAP17AQ02040 695 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 BAATQ14032 418 aaPredicted RBP16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 ZNF792Q3KQV3 632 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 RNF207Q6ZRF8 634 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 MCF2L2Q86YR7 1114 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 TRMT44Q8IYL2 757 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 SLAIN1Q8ND83 568 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 RGS22Q8NE09 1264 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 PHKBQ93100 1093 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 ZSCAN31Q96LW9 406 aaPredicted RBP16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 SLC26A6Q9BXS9 759 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 RBM27Q9P2N5 1060 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 ZNF236Q9UL36 1845 aa16.7■□□□□ 0.26
DNMT3A-208ENST00000466601 ZNFX1Q9P2E3 1918 aaKnown RBP16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 PTPDC1A2A3K4 754 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 POTEB2H3BUK9 544 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 PPFIA3O75145 1194 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 SSRP1Q08945 709 aaKnown RBP16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 CCL14Q16627 93 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 SLC9C1Q4G0N8 1177 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 HEATR3Q7Z4Q2 680 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 TRIB2Q92519 343 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 TBC1D5Q92609 795 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 GTF3C6Q969F1 213 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 RNF26Q9BY78 433 aaPredicted RBP16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 MAF1Q9H063 256 aa16.69■□□□□ 0.26
DNMT3A-208ENST00000466601 OPLAHO14841 1288 aa16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 CDKL5O76039 1030 aa16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 CFBP00751 764 aa16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 CALML3P27482 149 aa16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 RPS6P62753 249 aaKnown RBP16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 CNTN2Q02246 1040 aa16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 PFKFB3Q16875 520 aaPredicted RBP16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 WWC2Q6AWC2 1192 aa16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 SLC30A10Q6XR72 485 aa16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 TRIM22Q8IYM9 498 aa16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 FAM133AQ8N9E0 248 aa16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 GPKOWQ92917 476 aaPredicted RBP eCLIP16.68■□□□□ 0.26
DNMT3A-208ENST00000466601 MAML3Q96JK9 1138 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms