RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 VAV3Q9UKW4 847 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 TCFL5Q9UL49 500 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 NPFFR2Q9Y5X5 522 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 hCG_2014768A0A024R1R8 64 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 H3BS24 57 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 RBAK-RBAKDNI3L0D1 243 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 PROCP04070 461 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 SYPP08247 313 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 ANAPC15P60006 121 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 NTRK3Q16288 839 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 C21orf62-AS1Q17RA5 79 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 STYK1Q6J9G0 422 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 KSR1Q8IVT5 923 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 DHX37Q8IY37 1157 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 NPLOC4Q8TAT6 608 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 SLC7A14Q8TBB6 771 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 FRS2Q8WU20 508 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 MISP3Q96FF7 219 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 GPATCH3Q96I76 525 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 MAGEB10Q96LZ2 347 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 SPOCK3Q9BQ16 436 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 PCDH12Q9NPG4 1184 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 ZC3H7BQ9UGR2 993 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 SFMBT1Q9UHJ3 866 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 U3KQE9 123 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 PITPNM2Q9BZ72 1349 aa6.2□□□□□ -1.42
CDC42BPA-211ENST00000466538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 STXBP3O00186 592 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 DYRK3O43781 588 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 THBDP07204 575 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 GSTM1P09488 218 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 MYCLP1P12525 358 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 PRKCQQ04759 706 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 RTP2Q5QGT7 225 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 USP53Q70EK8 1073 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 AHI1Q8N157 1196 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 PLD6Q8N2A8 252 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 CHAC2Q8WUX2 184 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 HRASLS5Q96KN8 279 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 MMP19Q99542 508 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 CAAP1Q9H8G2 361 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 TRIM39Q9HCM9 518 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 GPRC5CQ9NQ84 441 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 GPR27Q9NS67 375 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 NDOR1Q9UHB4 597 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 MAPRE3Q9UPY8 281 aa6.19□□□□□ -1.42
CDC42BPA-211ENST00000466538 A0A087X0B3 334 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 WASH4PA8MWX3 477 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 B4E1Z4 1266 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 FGF10O15520 208 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 MEFVO15553 781 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 NPTXRO95502 500 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 TBC1D8O95759 1140 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 ASLP04424 464 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 IFNGR1P15260 489 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 POU3F2P20265 443 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 LTKP29376 864 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 SOX5P35711 763 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 LTBRP36941 435 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 KCNAB2Q13303 367 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 DENND5AQ6IQ26 1287 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 INTS5Q6P9B9 1019 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 LRRTM3Q86VH5 581 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 CREG2Q8IUH2 290 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 DDX1Q92499 740 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 FOXP3Q9BZS1 431 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 SLC52A2Q9HAB3 445 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 LMCD1Q9NZU5 365 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 ZNF281Q9Y2X9 895 aa6.18□□□□□ -1.42
CDC42BPA-211ENST00000466538 IRS4O14654 1257 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 ESR1P03372 595 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 PAMP19021 973 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 SDSP20132 328 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 FLT3P36888 993 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 GRIK1P39086 918 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 STAT3P40763 770 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 GPR85P60893 370 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 AOC3Q16853 763 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 PRSS53Q2L4Q9 553 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 CYP2R1Q6VVX0 501 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 THNSL2Q86YJ6 484 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 PPIL6Q8IXY8 311 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 IFNL3Q8IZI9 196 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 STK11IPQ8N1F8 1099 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 PPM1KQ8N3J5 372 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 DIO2Q92813 273 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 SYTL4Q96C24 671 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 ATP13A1Q9HD20 1204 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 PCDHA11Q9Y5I1 949 aa6.17□□□□□ -1.42
CDC42BPA-211ENST00000466538 NPHP3-ACAD11A0A0J9YXS1 232 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 BLACEA4D250 179 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 GSG1L2A8MUP6 293 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 PDE8AO60658 829 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 PLS3P13797 630 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 AMPD3Q01432 767 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 TEKQ02763 1124 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 EGR3Q06889 387 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 BRAPQ7Z569 592 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms