RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 TRDNQ13061 729 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 CERKLQ49MI3 558 aaPredicted RBP8.18□□□□□ -1.1
CLDN4-204ENST00000466411 C6orf132Q5T0Z8 1188 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 TATDN1Q6P1N9 297 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 CTR9Q6PD62 1173 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 C16orf86Q6ZW13 317 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 GJD3Q8N144 294 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 FAM227BQ96M60 508 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 APBA2Q99767 749 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 PORCNQ9H237 461 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 MKNK2Q9HBH9 465 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 RBPJLQ9UBG7 517 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 A0A0G2JMZ2 1700 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 PLXNA3P51805 1871 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 GREB1LQ9C091 1923 aaPredicted RBP8.17□□□□□ -1.1
CLDN4-204ENST00000466411 USP17L12C9JPN9 530 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 USP17L21D6R901 530 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 ZNF213O14771 459 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 CYBAP13498 195 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 RAG1P15918 1043 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 MCCP23508 829 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 CAP2P40123 477 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 RGS2P41220 211 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 USP14P54578 494 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 GABPAQ06546 454 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 PPARAQ07869 468 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 FAAP100Q0VG06 881 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 PABPC4Q13310 644 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLDN4-204ENST00000466411 KRT32Q14532 448 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 AMHR2Q16671 573 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 KRT40Q6A162 431 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 CCDC129Q6ZRS4 1044 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 TMEM179Q6ZVK1 233 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 HFE2Q6ZVN8 426 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 SH3BP5LQ7L8J4 393 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 GPR142Q7Z601 462 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 ARRDC4Q8NCT1 418 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 HLA-CQ95604 372 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 ESYT1Q9BSJ8 1104 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 KRT23Q9C075 422 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 KDM4CQ9H3R0 1056 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 SAP30BPQ9UHR5 308 aaKnown RBP8.17□□□□□ -1.1
CLDN4-204ENST00000466411 PLIN4Q96Q06 1357 aa8.17□□□□□ -1.1
CLDN4-204ENST00000466411 USP17L5A8MUK1 530 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 MINDY4BA8MYZ0 360 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 RFXAPO00287 272 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 ORC4O43929 436 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 TIMP1P01033 207 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 FGAP02671 866 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 HOXC6P09630 235 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 ALADP13716 330 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 MAPK4P31152 587 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 TCF15Q12870 199 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 SART3Q15020 963 aaKnown RBP8.16□□□□□ -1.1
CLDN4-204ENST00000466411 RAB30Q15771 203 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 ABCB5Q2M3G0 1257 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 SH3D19Q5HYK7 790 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 MFSD6Q6ZSS7 791 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 ZNF589Q86UQ0 364 aaPredicted RBP8.16□□□□□ -1.1
CLDN4-204ENST00000466411 ZNF444Q8N0Y2 327 aaPredicted RBP8.16□□□□□ -1.1
CLDN4-204ENST00000466411 MICALL1Q8N3F8 863 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 ESR2Q92731 530 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 FERMT2Q96AC1 680 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 SEC62Q99442 399 aaKnown RBP8.16□□□□□ -1.1
CLDN4-204ENST00000466411 MTA3Q9BTC8 594 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 WDR18Q9BV38 432 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 KANSL2Q9H9L4 492 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 SLC28A3Q9HAS3 691 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 ARHGEF10LQ9HCE6 1279 aa8.16□□□□□ -1.1
CLDN4-204ENST00000466411 MYH4Q9Y623 1939 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 DMDP11532 3685 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 DNAH14Q0VDD8 3507 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 EPOPA6NHQ4 379 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 C19orf81C9J6K1 198 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 PRKAB2O43741 272 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 GFRA3O60609 400 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 HMGB1P09429 215 aaKnown RBP8.15□□□□□ -1.1
CLDN4-204ENST00000466411 FGRP09769 529 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 TSPY3P0CV98 308 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 TSPY8P0CW00 308 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 HOXA7P31268 230 aaPredicted RBP8.15□□□□□ -1.1
CLDN4-204ENST00000466411 SHMT1P34896 483 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 CDK8P49336 464 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 PLCD1P51178 756 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 LRRC41Q15345 812 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 SKIV2LQ15477 1246 aaKnown RBP8.15□□□□□ -1.1
CLDN4-204ENST00000466411 MFSD5Q6N075 450 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 PADI6Q6TGC4 694 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 ZNF365Q70YC5 407 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 ANKRD33Q7Z3H0 272 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 RALYLQ86SE5 291 aaKnown RBP8.15□□□□□ -1.1
CLDN4-204ENST00000466411 IQCA1Q86XH1 822 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 PARP9Q8IXQ6 854 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 GPRC5AQ8NFJ5 357 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 NPLOC4Q8TAT6 608 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 GTF3C2Q8WUA4 911 aaPredicted RBP8.15□□□□□ -1.1
CLDN4-204ENST00000466411 STAG1Q8WVM7 1258 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 MAP4K1Q92918 833 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 TOX2Q96NM4 488 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms