RNA–Protein interactions for RNA: ENST00000466396.5

CLTA-206, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-206ENST00000466396 TRPV1Q8NER1 839 aa26.68■■□□□ 1.86
CLTA-206ENST00000466396 ZSWIM6Q9HCJ5 1215 aa26.68■■□□□ 1.86
CLTA-206ENST00000466396 GJB1P08034 283 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 PSMA5P28066 241 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 CCND3P30281 292 aaPredicted RBP26.67■■□□□ 1.86
CLTA-206ENST00000466396 RGS19P49795 217 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 CNTN2Q02246 1040 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 USH1GQ495M9 461 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 MFSD14CQ5VZR4 134 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 Q6ZUG5 572 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 CCDC144CPQ8IYA2 1237 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.67■■□□□ 1.86
CLTA-206ENST00000466396 CYP39A1Q9NYL5 469 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 GTF3C3Q9Y5Q9 886 aa26.67■■□□□ 1.86
CLTA-206ENST00000466396 PLEKHA8P1O95397 391 aa26.66■■□□□ 1.86
CLTA-206ENST00000466396 FBXL16Q8N461 479 aa26.66■■□□□ 1.86
CLTA-206ENST00000466396 FAM133AQ8N9E0 248 aa26.66■■□□□ 1.86
CLTA-206ENST00000466396 CTCFLQ8NI51 663 aaPredicted RBP26.66■■□□□ 1.86
CLTA-206ENST00000466396 SHISA4Q96DD7 197 aa26.66■■□□□ 1.86
CLTA-206ENST00000466396 PIGSQ96S52 555 aa26.66■■□□□ 1.86
CLTA-206ENST00000466396 AGXT2Q9BYV1 514 aa26.66■■□□□ 1.86
CLTA-206ENST00000466396 HMX1Q9NP08 348 aaPredicted RBP26.66■■□□□ 1.86
CLTA-206ENST00000466396 PNMA2Q9UL42 364 aa26.66■■□□□ 1.86
CLTA-206ENST00000466396 CALM1P0DP23 149 aa26.65■■□□□ 1.86
CLTA-206ENST00000466396 CALM2P0DP24 149 aa26.65■■□□□ 1.86
CLTA-206ENST00000466396 CALM3P0DP25 149 aa26.65■■□□□ 1.86
CLTA-206ENST00000466396 RUFY3Q7L099 469 aa26.65■■□□□ 1.86
CLTA-206ENST00000466396 MICU3Q86XE3 530 aa26.65■■□□□ 1.86
CLTA-206ENST00000466396 SRBD1Q8N5C6 995 aaKnown RBP26.65■■□□□ 1.86
CLTA-206ENST00000466396 FANCBQ8NB91 859 aa26.65■■□□□ 1.86
CLTA-206ENST00000466396 PURBQ96QR8 312 aaKnown RBP26.65■■□□□ 1.86
CLTA-206ENST00000466396 TM6SF1Q9BZW5 370 aa26.65■■□□□ 1.86
CLTA-206ENST00000466396 ASTN1O14525 1302 aa26.65■■□□□ 1.86
CLTA-206ENST00000466396 SOWAHBA6NEL2 793 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 ZBTB5O15062 677 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 CYBAP13498 195 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 KIF5BP33176 963 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 GJA8P48165 433 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 PRAMEF19Q5SWL8 479 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 NSMFQ6X4W1 530 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 FBXO11Q86XK2 927 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 CMTR1Q8N1G2 835 aaKnown RBP26.64■■□□□ 1.86
CLTA-206ENST00000466396 DEFB118Q96PH6 123 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 TINF2Q9BSI4 451 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 SPZ1Q9BXG8 430 aa26.64■■□□□ 1.86
CLTA-206ENST00000466396 PFASO15067 1338 aa26.64■■□□□ 1.85
CLTA-206ENST00000466396 KLF18A0A0U1RQI7 1052 aa26.63■■□□□ 1.85
CLTA-206ENST00000466396 POTEB2H3BUK9 544 aa26.63■■□□□ 1.85
CLTA-206ENST00000466396 SMARCA1P28370 1054 aa26.63■■□□□ 1.85
CLTA-206ENST00000466396 APOBRQ0VD83 1088 aa26.63■■□□□ 1.85
CLTA-206ENST00000466396 BAATQ14032 418 aaPredicted RBP26.63■■□□□ 1.85
CLTA-206ENST00000466396 MAMDC4Q6UXC1 1216 aa26.63■■□□□ 1.85
CLTA-206ENST00000466396 ZNF467Q7Z7K2 595 aaPredicted RBP26.63■■□□□ 1.85
CLTA-206ENST00000466396 HOMER1Q86YM7 354 aa26.63■■□□□ 1.85
CLTA-206ENST00000466396 U2AF1L4Q8WU68 220 aaKnown RBP26.63■■□□□ 1.85
CLTA-206ENST00000466396 TBC1D5Q92609 795 aa26.63■■□□□ 1.85
CLTA-206ENST00000466396 BRF1Q92994 677 aa26.63■■□□□ 1.85
CLTA-206ENST00000466396 ABCB11O95342 1321 aa26.63■■□□□ 1.85
CLTA-206ENST00000466396 MCM3APO60318 1980 aa26.62■■□□□ 1.85
CLTA-206ENST00000466396 SGPL1O95470 568 aa26.62■■□□□ 1.85
CLTA-206ENST00000466396 SLC30A10Q6XR72 485 aa26.62■■□□□ 1.85
CLTA-206ENST00000466396 IL17RAQ96F46 866 aa26.62■■□□□ 1.85
CLTA-206ENST00000466396 UPF3BQ9BZI7 483 aaKnown RBP26.62■■□□□ 1.85
CLTA-206ENST00000466396 CRISPLD2Q9H0B8 497 aa26.62■■□□□ 1.85
CLTA-206ENST00000466396 FAM217BQ9NTX9 383 aaPredicted RBP26.62■■□□□ 1.85
CLTA-206ENST00000466396 OPLAHO14841 1288 aa26.61■■□□□ 1.85
CLTA-206ENST00000466396 ZBTB43O43298 467 aa26.61■■□□□ 1.85
CLTA-206ENST00000466396 SNAI1O95863 264 aaPredicted RBP26.61■■□□□ 1.85
CLTA-206ENST00000466396 TOB2Q14106 344 aaPredicted RBP26.61■■□□□ 1.85
CLTA-206ENST00000466396 SYNE3Q6ZMZ3 975 aa26.61■■□□□ 1.85
CLTA-206ENST00000466396 TMTC3Q6ZXV5 915 aa26.61■■□□□ 1.85
CLTA-206ENST00000466396 PIBF1Q8WXW3 757 aa26.61■■□□□ 1.85
CLTA-206ENST00000466396 LZTS2Q9BRK4 669 aa26.61■■□□□ 1.85
CLTA-206ENST00000466396 AMNQ9BXJ7 453 aa26.61■■□□□ 1.85
CLTA-206ENST00000466396 CYP46A1Q9Y6A2 500 aa26.61■■□□□ 1.85
CLTA-206ENST00000466396 DDX49Q9Y6V7 483 aaKnown RBP26.61■■□□□ 1.85
CLTA-206ENST00000466396 PNMA6FA0A0J9YX94 578 aa26.6■■□□□ 1.85
CLTA-206ENST00000466396 GNAQP50148 359 aa26.6■■□□□ 1.85
CLTA-206ENST00000466396 ANAPC15P60006 121 aa26.6■■□□□ 1.85
CLTA-206ENST00000466396 RPS6P62753 249 aaKnown RBP26.6■■□□□ 1.85
CLTA-206ENST00000466396 FGD1P98174 961 aa26.6■■□□□ 1.85
CLTA-206ENST00000466396 LHX8Q68G74 356 aa26.6■■□□□ 1.85
CLTA-206ENST00000466396 MSL3Q8N5Y2 521 aaKnown RBP26.6■■□□□ 1.85
CLTA-206ENST00000466396 RGS22Q8NE09 1264 aa26.6■■□□□ 1.85
CLTA-206ENST00000466396 PTPDC1A2A3K4 754 aa26.59■■□□□ 1.85
CLTA-206ENST00000466396 CDC27P30260 824 aa26.59■■□□□ 1.85
CLTA-206ENST00000466396 FUT2Q10981 343 aa26.59■■□□□ 1.85
CLTA-206ENST00000466396 RNF207Q6ZRF8 634 aa26.59■■□□□ 1.85
CLTA-206ENST00000466396 SYNGAP1Q96PV0 1343 aa26.59■■□□□ 1.85
CLTA-206ENST00000466396 FRMPD3Q5JV73 1810 aa26.58■■□□□ 1.85
CLTA-206ENST00000466396 EIF5BO60841 1220 aaKnown RBP26.58■■□□□ 1.85
CLTA-206ENST00000466396 ZNF865P0CJ78 1059 aaPredicted RBP26.58■■□□□ 1.85
CLTA-206ENST00000466396 RCAN1P53805 252 aa26.58■■□□□ 1.85
CLTA-206ENST00000466396 EVCP57679 992 aa26.58■■□□□ 1.85
CLTA-206ENST00000466396 RTN1Q16799 776 aa26.58■■□□□ 1.85
CLTA-206ENST00000466396 CCDC82Q8N4S0 544 aa26.58■■□□□ 1.85
CLTA-206ENST00000466396 MRPL11Q9Y3B7 192 aaKnown RBP26.58■■□□□ 1.85
CLTA-206ENST00000466396 PCDHA1Q9Y5I3 950 aa26.58■■□□□ 1.85
CLTA-206ENST00000466396 GOLGA8AA7E2F4 631 aa26.57■■□□□ 1.84
CLTA-206ENST00000466396 GOLGA8BA8MQT2 603 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms