RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 ZNFX1Q9P2E3 1918 aaKnown RBP18.46■□□□□ 0.55
AGRN-204ENST00000466223 ABCB11O95342 1321 aa18.46■□□□□ 0.55
AGRN-204ENST00000466223 PLEKHA8P1O95397 391 aa18.45■□□□□ 0.54
AGRN-204ENST00000466223 PDIA3P30101 505 aaKnown RBP18.45■□□□□ 0.54
AGRN-204ENST00000466223 GRK4P32298 578 aa18.45■□□□□ 0.54
AGRN-204ENST00000466223 CMTR1Q8N1G2 835 aaKnown RBP18.45■□□□□ 0.54
AGRN-204ENST00000466223 SRBD1Q8N5C6 995 aaKnown RBP18.45■□□□□ 0.54
AGRN-204ENST00000466223 PIBF1Q8WXW3 757 aa18.45■□□□□ 0.54
AGRN-204ENST00000466223 USP6NLQ92738 828 aa18.45■□□□□ 0.54
AGRN-204ENST00000466223 MTMR8Q96EF0 704 aa18.45■□□□□ 0.54
AGRN-204ENST00000466223 APBA2Q99767 749 aa18.45■□□□□ 0.54
AGRN-204ENST00000466223 MRPL11Q9Y3B7 192 aaKnown RBP18.45■□□□□ 0.54
AGRN-204ENST00000466223 BAZ2BQ9UIF8 2168 aaKnown RBP18.45■□□□□ 0.54
AGRN-204ENST00000466223 CYTH3O43739 400 aa18.44■□□□□ 0.54
AGRN-204ENST00000466223 AK2P54819 239 aa18.44■□□□□ 0.54
AGRN-204ENST00000466223 CPLX2Q6PUV4 134 aaKnown RBP18.44■□□□□ 0.54
AGRN-204ENST00000466223 IL27Q8NEV9 243 aa18.44■□□□□ 0.54
AGRN-204ENST00000466223 ABHD8Q96I13 439 aa18.44■□□□□ 0.54
AGRN-204ENST00000466223 HPS5Q9UPZ3 1129 aa18.44■□□□□ 0.54
AGRN-204ENST00000466223 PCDHA1Q9Y5I3 950 aa18.44■□□□□ 0.54
AGRN-204ENST00000466223 PFASO15067 1338 aa18.44■□□□□ 0.54
AGRN-204ENST00000466223 CPLX1O14810 134 aa18.43■□□□□ 0.54
AGRN-204ENST00000466223 HOXC6P09630 235 aa18.43■□□□□ 0.54
AGRN-204ENST00000466223 ADD1P35611 737 aaKnown RBP18.43■□□□□ 0.54
AGRN-204ENST00000466223 UBXN2AP68543 259 aa18.43■□□□□ 0.54
AGRN-204ENST00000466223 CCT2P78371 535 aaKnown RBP18.43■□□□□ 0.54
AGRN-204ENST00000466223 RABEP1Q15276 862 aa18.43■□□□□ 0.54
AGRN-204ENST00000466223 NSMFQ6X4W1 530 aa18.43■□□□□ 0.54
AGRN-204ENST00000466223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.43■□□□□ 0.54
AGRN-204ENST00000466223 MCF2L2Q86YR7 1114 aa18.43■□□□□ 0.54
AGRN-204ENST00000466223 LARP6Q9BRS8 491 aaKnown RBP18.43■□□□□ 0.54
AGRN-204ENST00000466223 PTPDC1A2A3K4 754 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 POTEB2H3BUK9 544 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 PGK2P07205 417 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 ELNP15502 786 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 CDC27P30260 824 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 AKAP17AQ02040 695 aaKnown RBP18.42■□□□□ 0.54
AGRN-204ENST00000466223 STK3Q13188 491 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 MUM1L1Q5H9M0 696 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 MAF1Q9H063 256 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 SLKQ9H2G2 1235 aaPredicted RBP18.42■□□□□ 0.54
AGRN-204ENST00000466223 DIS3Q9Y2L1 958 aaKnown RBP18.42■□□□□ 0.54
AGRN-204ENST00000466223 ZNF236Q9UL36 1845 aa18.42■□□□□ 0.54
AGRN-204ENST00000466223 SMCHD1A6NHR9 2005 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 ST18O60284 1047 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 COBLO75128 1261 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 HMGCRP04035 888 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 SLC35G1Q2M3R5 365 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 RNF207Q6ZRF8 634 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 NOL8Q76FK4 1167 aaKnown RBP18.41■□□□□ 0.54
AGRN-204ENST00000466223 RGS22Q8NE09 1264 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 SH3TC2Q8TF17 1288 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 A1CFQ9NQ94 594 aaKnown RBP18.41■□□□□ 0.54
AGRN-204ENST00000466223 FAM217BQ9NTX9 383 aaPredicted RBP18.41■□□□□ 0.54
AGRN-204ENST00000466223 RBM27Q9P2N5 1060 aaKnown RBP18.41■□□□□ 0.54
AGRN-204ENST00000466223 V9GY48 417 aaPredicted RBP18.41■□□□□ 0.54
AGRN-204ENST00000466223 NID2Q14112 1375 aa18.41■□□□□ 0.54
AGRN-204ENST00000466223 NFIBO00712 420 aa18.4■□□□□ 0.54
AGRN-204ENST00000466223 TAL1P17542 331 aaPredicted RBP18.4■□□□□ 0.54
AGRN-204ENST00000466223 BAATQ14032 418 aaPredicted RBP18.4■□□□□ 0.54
AGRN-204ENST00000466223 NPLOC4Q8TAT6 608 aa18.4■□□□□ 0.54
AGRN-204ENST00000466223 CYP39A1Q9NYL5 469 aa18.4■□□□□ 0.54
AGRN-204ENST00000466223 TPCN1Q9ULQ1 816 aa18.4■□□□□ 0.54
AGRN-204ENST00000466223 CDKL5O76039 1030 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 CALML3P27482 149 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 CCL14Q16627 93 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 ZNF792Q3KQV3 632 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 OLFML2BQ68BL8 750 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 TRIM22Q8IYM9 498 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 CLEC4DQ8WXI8 215 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 ARMC5Q96C12 935 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 MAML3Q96JK9 1138 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 MPHOSPH6Q99547 160 aaKnown RBP18.39■□□□□ 0.53
AGRN-204ENST00000466223 KIF2CQ99661 725 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 NCOA5Q9HCD5 579 aaKnown RBP18.39■□□□□ 0.53
AGRN-204ENST00000466223 ADD3Q9UEY8 706 aaKnown RBP18.39■□□□□ 0.53
AGRN-204ENST00000466223 CNTNAP5Q8WYK1 1306 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 PLXNA1Q9UIW2 1896 aa18.39■□□□□ 0.53
AGRN-204ENST00000466223 DNAJC25-GNG10A0A024R161 153 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 hCG_1642624A0A1W2PR95 340 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 PFKFB2O60825 505 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 PPP1R11O60927 126 aaPredicted RBP18.38■□□□□ 0.53
AGRN-204ENST00000466223 CFBP00751 764 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 INHAP05111 366 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 IFNAR1P17181 557 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 MSL3Q8N5Y2 521 aaKnown RBP18.38■□□□□ 0.53
AGRN-204ENST00000466223 SAMD3Q8N6K7 520 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 TRIB2Q92519 343 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 MAP3K20Q9NYL2 800 aaKnown RBP18.38■□□□□ 0.53
AGRN-204ENST00000466223 LIMCH1Q9UPQ0 1083 aa18.38■□□□□ 0.53
AGRN-204ENST00000466223 B4DLN1 442 aa18.37■□□□□ 0.53
AGRN-204ENST00000466223 hCG_1984214I3L0E3 225 aa18.37■□□□□ 0.53
AGRN-204ENST00000466223 PRPF3O43395 683 aaKnown RBP18.37■□□□□ 0.53
AGRN-204ENST00000466223 MRPL12P52815 198 aaKnown RBP18.37■□□□□ 0.53
AGRN-204ENST00000466223 RPS6P62753 249 aaKnown RBP18.37■□□□□ 0.53
AGRN-204ENST00000466223 SSRP1Q08945 709 aaKnown RBP18.37■□□□□ 0.53
AGRN-204ENST00000466223 FUT2Q10981 343 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms