RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 C12orf42Q96LP6 360 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 AMNQ9BXJ7 453 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 GBA2Q9HCG7 927 aaPredicted RBP21.23■□□□□ 0.99
CAPN3-209ENST00000466222 CFAP45Q9UL16 551 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 MKRN3Q13064 507 aaKnown RBP21.23■□□□□ 0.99
CAPN3-209ENST00000466222 SH3D19Q5HYK7 790 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 AGBL1Q96MI9 1066 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 ZNF396Q96N95 335 aaPredicted RBP21.23■□□□□ 0.99
CAPN3-209ENST00000466222 TMOD4Q9NZQ9 345 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 PCDHB6Q9Y5E3 794 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L15C9J2P7 530 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L13C9JLJ4 530 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L11C9JVI0 530 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L18D6R9N7 530 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L22D6RA61 530 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L17D6RBQ6 530 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L19D6RCP7 530 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L20D6RJB6 530 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L24Q0WX57 530 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 SF3A1Q15459 793 aaKnown RBP21.22■□□□□ 0.99
CAPN3-209ENST00000466222 JAKMIP3Q5VZ66 844 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 ATL3Q6DD88 541 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 USP17L6PQ6QN14 398 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 CCDC12Q8WUD4 166 aaPredicted RBP21.22■□□□□ 0.99
CAPN3-209ENST00000466222 ATG4CQ96DT6 458 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 SLC10A4Q96EP9 437 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 TNMDQ9H2S6 317 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 CLSTN2Q9H4D0 955 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 GPBP1L1Q9HC44 474 aaPredicted RBP21.22■□□□□ 0.99
CAPN3-209ENST00000466222 C6orf50Q9HD87 102 aa21.22■□□□□ 0.99
CAPN3-209ENST00000466222 OPLAHO14841 1288 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 CAVIN2O95810 425 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 CPXCR1Q8N123 301 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 DAGLBQ8NCG7 672 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 RBM46Q8TBY0 533 aaKnown RBP21.21■□□□□ 0.99
CAPN3-209ENST00000466222 MAP7D2Q96T17 732 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 RTEL1Q9NZ71 1219 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 PPP1R9AQ9ULJ8 1098 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 ZNF536O15090 1300 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 DOCK1Q14185 1865 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 hCG_1984214I3L0E3 225 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 DYNC1I1O14576 645 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 PEX10O60683 326 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 LIG1P18858 919 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 ADCY7P51828 1080 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 TYRO3Q06418 890 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 ANO1Q5XXA6 986 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 GADL1Q6ZQY3 521 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 ZNF713Q8N859 430 aaPredicted RBP21.21■□□□□ 0.99
CAPN3-209ENST00000466222 LINC00301Q8NCQ3 95 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 TBC1D5Q92609 795 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 PSTPIP2Q9H939 334 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 RAVER2Q9HCJ3 691 aaKnown RBP21.21■□□□□ 0.99
CAPN3-209ENST00000466222 MRVI1Q9Y6F6 885 aa21.21■□□□□ 0.99
CAPN3-209ENST00000466222 ATAD5Q96QE3 1844 aa21.2■□□□□ 0.98
CAPN3-209ENST00000466222 A0A0G2JLL6 359 aaPredicted RBP21.2■□□□□ 0.98
CAPN3-209ENST00000466222 GNA11P29992 359 aa21.2■□□□□ 0.98
CAPN3-209ENST00000466222 GLIPR1L2Q4G1C9 344 aa21.2■□□□□ 0.98
CAPN3-209ENST00000466222 CATSPERGQ6ZRH7 1159 aa21.2■□□□□ 0.98
CAPN3-209ENST00000466222 PRRT2Q7Z6L0 340 aaPredicted RBP21.2■□□□□ 0.98
CAPN3-209ENST00000466222 P2RX7Q99572 595 aaKnown RBP21.2■□□□□ 0.98
CAPN3-209ENST00000466222 RIC8AQ9NPQ8 531 aa21.2■□□□□ 0.98
CAPN3-209ENST00000466222 RCOR1Q9UKL0 485 aa21.2■□□□□ 0.98
CAPN3-209ENST00000466222 ESYT2A0FGR8 921 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 GALNT17Q6IS24 598 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 C2orf69Q8N8R5 385 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 PDCL3Q9H2J4 239 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 SLC38A10Q9HBR0 1119 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 POLR3EQ9NVU0 708 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 UQCRHLA0A096LP55 91 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 UQCRHP07919 91 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 MARCKSP29966 332 aaPredicted RBP21.19■□□□□ 0.98
CAPN3-209ENST00000466222 PPIL2Q13356 520 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 MOGSQ13724 837 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 INF2Q27J81 1249 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 POTEEQ6S8J3 1075 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 REXO1Q8N1G1 1221 aaKnown RBP21.19■□□□□ 0.98
CAPN3-209ENST00000466222 UBE2Q2Q8WVN8 375 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 SPTLC3Q9NUV7 552 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 DACT1Q9NYF0 836 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 KCNH4Q9UQ05 1017 aa21.19■□□□□ 0.98
CAPN3-209ENST00000466222 VWA5AO00534 786 aa21.18■□□□□ 0.98
CAPN3-209ENST00000466222 KIF3CO14782 793 aa21.18■□□□□ 0.98
CAPN3-209ENST00000466222 PTPAQ15257 358 aa21.18■□□□□ 0.98
CAPN3-209ENST00000466222 RILPL1Q5EBL4 403 aa21.18■□□□□ 0.98
CAPN3-209ENST00000466222 PRIMPOLQ96LW4 560 aa21.18■□□□□ 0.98
CAPN3-209ENST00000466222 CCDC194A0A1B0GVG4 234 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 CXCL11O14625 94 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 MEIS2O14770 477 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 HOXA13P31271 388 aaPredicted RBP21.17■□□□□ 0.98
CAPN3-209ENST00000466222 COG2Q14746 738 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 NOLC1Q14978 699 aaKnown RBP eCLIP21.17■□□□□ 0.98
CAPN3-209ENST00000466222 ZNF174Q15697 407 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 PPP1R18Q6NYC8 613 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 CUL5Q93034 780 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 PAPPA2Q9BXP8 1791 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 DSG3P32926 999 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 CLK2P49760 499 aaKnown RBP21.17■□□□□ 0.98
CAPN3-209ENST00000466222 STK38Q15208 465 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 MTERF4Q7Z6M4 381 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms