RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 MAP3K12Q12852 859 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 SNX17Q15036 470 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 PTPROQ16827 1216 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 C1QTNF12Q5T7M4 302 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 ADAMTS19Q8TE59 1207 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 PMM1Q92871 262 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 NECAB3Q96P71 396 aaPredicted RBP8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 SPOCK3Q9BQ16 436 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 RIOK1Q9BRS2 568 aaKnown RBP8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 RWDD1Q9H446 243 aaPredicted RBP8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 AATFQ9NY61 560 aaKnown RBP eCLIP8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 BTBD7Q9P203 1132 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 HERC5Q9UII4 1024 aaKnown RBP8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 ZBTB21Q9ULJ3 1066 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 FLT1P17948 1338 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 CBFA2T2O43439 604 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 MSCO60682 206 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 IGHA2P01877 340 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 CHGBP05060 677 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 TPM3P06753 285 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 ADD2P35612 726 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 MLLT3P42568 568 aaPredicted RBP8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 DYNLL1P63167 89 aaKnown RBP8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 NUCB1Q02818 461 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 GRB14Q14449 540 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 CT47A1Q5JQC4 288 aaPredicted RBP8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 PRAMEF19Q5SWL8 479 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 ANKRD45Q5TZF3 282 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 MAPKAPK5Q8IW41 473 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 MIGA1Q8NAN2 632 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 ARRDC4Q8NCT1 418 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 GLMNQ92990 594 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 NOL10Q9BSC4 688 aaKnown RBP8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 LNPKQ9C0E8 428 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 NUCKS1Q9H1E3 243 aaKnown RBP8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 ZNF576Q9H609 170 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 MED4Q9NPJ6 270 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 PI4KBQ9UBF8 816 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 RABGAP1Q9Y3P9 1069 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 U3KPZ7 1027 aaPredicted RBP8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 ZNF532Q9HCE3 1301 aa8.46□□□□□ -1.06
RPUSD3-212ENST00000466141 TLDC2A0PJX2 215 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 PES1O00541 588 aaKnown RBP8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 GLRX3O76003 335 aaKnown RBP8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 BAG3O95817 575 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 GH2P01242 217 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 HOXC6P09630 235 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 SETSIPP0DME0 302 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 VAMP1P23763 118 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 PBX2P40425 430 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 PDE1AP54750 535 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 CCNA1P78396 465 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 LRRC41Q15345 812 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 CCDC85BQ15834 202 aaPredicted RBP8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 SLFNL1Q499Z3 407 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 FAM47AQ5JRC9 791 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 SLC9C2Q5TAH2 1124 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L2Q6R6M4 530 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 CRACR2BQ8N4Y2 399 aaPredicted RBP8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 KBTBD3Q8NAB2 608 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 GTF3C2Q8WUA4 911 aaPredicted RBP8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 TGFBRAP1Q8WUH2 860 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 TIFAQ96CG3 184 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 SNX27Q96L92 541 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 ASB2Q96Q27 587 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 UHRF1Q96T88 793 aaPredicted RBP8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 PRDM12Q9H4Q4 367 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 THEGQ9P2T0 379 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 SAP30BPQ9UHR5 308 aaKnown RBP8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 PALD1Q9ULE6 856 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 PARP14Q460N5 1801 aa8.45□□□□□ -1.06
RPUSD3-212ENST00000466141 GRXCR1A8MXD5 290 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L15C9J2P7 530 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L13C9JLJ4 530 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L11C9JVI0 530 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L18D6R9N7 530 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L22D6RA61 530 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L17D6RBQ6 530 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L19D6RCP7 530 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L20D6RJB6 530 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 ERC2O15083 957 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 CLTBP09497 229 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 IBSPP21815 317 aaPredicted RBP8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 ADORA2AP29274 412 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 CASQ1P31415 396 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 POU5F1Q01860 360 aaKnown RBP8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 USP17L24Q0WX57 530 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 ADGRE1Q14246 886 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 UBE3CQ15386 1083 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 KLHL10Q6JEL2 608 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 EP400NLQ6ZTU2 488 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 CHD1LQ86WJ1 897 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 ACER1Q8TDN7 264 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 ERCC4Q92889 916 aaPredicted RBP8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 FEZ1Q99689 392 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 SENP7Q9BQF6 1050 aa8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.44□□□□□ -1.06
RPUSD3-212ENST00000466141 FAN1Q9Y2M0 1017 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms