RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GHRHRQ02643 423 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 FAM110CQ1W6H9 321 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 Q3C1V9 767 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 USH1GQ495M9 461 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 SNRNP48Q6IEG0 339 aaKnown RBP12.85□□□□□ -0.35
VCP-204ENST00000466100 C17orf99Q6UX52 265 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
VCP-204ENST00000466100 RIOX2Q8IUF8 465 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 CPXCR1Q8N123 301 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 FAM184AQ8NB25 1140 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 RGS22Q8NE09 1264 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 CLEC4DQ8WXI8 215 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 PAGR1Q9BTK6 254 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 R3HDMLQ9H3Y0 253 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 PNMA2Q9UL42 364 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 KIF3AQ9Y496 699 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 PCDHA1Q9Y5I3 950 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 LRRC37A2A6NM11 1700 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 ADAMTS3O15072 1205 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 TKFCQ3LXA3 575 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 MUM1L1Q5H9M0 696 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 KRT40Q6A162 431 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 ANKRD13CQ8N6S4 541 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 FBXO18Q8NFZ0 1043 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
VCP-204ENST00000466100 ZMYND12Q9H0C1 365 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 ZFYVE28Q9HCC9 887 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 CWC22Q9HCG8 908 aaKnown RBP12.84□□□□□ -0.35
VCP-204ENST00000466100 RNF186Q9NXI6 227 aa12.84□□□□□ -0.35
VCP-204ENST00000466100 M0R2N6 131 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 NFIBO00712 420 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 ALAS1P13196 640 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 SYT1P21579 422 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 FOSBP53539 338 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 NAPAP54920 295 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 TRAF1Q13077 416 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 DAGLBQ8NCG7 672 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 GPRC5AQ8NFJ5 357 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 C8orf76Q96K31 380 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 PORCNQ9H237 461 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 RNF146Q9NTX7 359 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 CPA4Q9UI42 421 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 KCNJ14Q9UNX9 436 aa12.83□□□□□ -0.36
VCP-204ENST00000466100 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
VCP-204ENST00000466100 MCM3APO60318 1980 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 CASP8AP2Q9UKL3 1982 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 SLC25A27O95847 323 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 MMP1P03956 469 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 PDCP20941 246 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 COPB2P35606 906 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 CLK2P49760 499 aaKnown RBP12.82□□□□□ -0.36
VCP-204ENST00000466100 PLS1Q14651 629 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 LARP1BQ659C4 914 aaKnown RBP12.82□□□□□ -0.36
VCP-204ENST00000466100 TEX2Q8IWB9 1127 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 CHST13Q8NET6 341 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 CCDC12Q8WUD4 166 aaPredicted RBP12.82□□□□□ -0.36
VCP-204ENST00000466100 TNFRSF25Q93038 417 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 TRERF1Q96PN7 1200 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 RIC8AQ9NPQ8 531 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 HOMER2Q9NSB8 354 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 SAGE1Q9NXZ1 904 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 MTMR6Q9Y217 621 aa12.82□□□□□ -0.36
VCP-204ENST00000466100 MRPL11Q9Y3B7 192 aaKnown RBP12.82□□□□□ -0.36
VCP-204ENST00000466100 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 PIK3CDO00329 1044 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 MEIS2O14770 477 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 XBP1P17861 261 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 ERCC3P19447 782 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 CALML3P27482 149 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 HSD17B4P51659 736 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 ADCY7P51828 1080 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 CCNA1P78396 465 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 PKP1Q13835 747 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 GALNT17Q6IS24 598 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 OXER1Q8TDS5 423 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 MAF1Q9H063 256 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 ACAD9Q9H845 621 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 PCDHA4Q9UN74 947 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 TCHHQ07283 1943 aa12.81□□□□□ -0.36
VCP-204ENST00000466100 STX6O43752 255 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 TRPA1O75762 1119 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 TBC1D8O95759 1140 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 TRIM29Q14134 588 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 UBE2SQ16763 222 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 SLC30A10Q6XR72 485 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 CUL5Q93034 780 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 MROH8Q9H579 483 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 PSTPIP2Q9H939 334 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 EFCC1Q9HA90 598 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 C6orf50Q9HD87 102 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 A1CFQ9NQ94 594 aaKnown RBP12.8□□□□□ -0.36
VCP-204ENST00000466100 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
VCP-204ENST00000466100 FBXO40Q9UH90 709 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 ZDHHC9Q9Y397 364 aa12.8□□□□□ -0.36
VCP-204ENST00000466100 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms