RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 RNF146Q9NTX7 359 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 FBXO40Q9UH90 709 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 GNEQ9Y223 722 aaKnown RBP12.3□□□□□ -0.44
GPNMB-206ENST00000465673 MYH4Q9Y623 1939 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 B4GALT4O60513 344 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 TTLL1O95922 423 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 MS4A1P11836 297 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 MCCP23508 829 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 NKX3-2P78367 333 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 TFAP4Q01664 338 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 ITGA7Q13683 1181 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 FSCN1Q16658 493 aaKnown RBP12.29□□□□□ -0.44
GPNMB-206ENST00000465673 MUM1L1Q5H9M0 696 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 GIMAP6Q6P9H5 292 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 KCTD1Q719H9 257 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 TLK2Q86UE8 772 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 FBXO16Q8IX29 292 aaPredicted RBP12.29□□□□□ -0.44
GPNMB-206ENST00000465673 IFNL3Q8IZI9 196 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 GMCL1P1Q8NEA9 526 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 PPP1R13LQ8WUF5 828 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
GPNMB-206ENST00000465673 SCLYQ96I15 445 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 TRERF1Q96PN7 1200 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 WNT8AQ9H1J5 351 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 ACAD9Q9H845 621 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 THEGQ9P2T0 379 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 MSRAQ9UJ68 235 aa12.29□□□□□ -0.44
GPNMB-206ENST00000465673 RFXAPO00287 272 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 NMT2O60551 498 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 TSPY3P0CV98 308 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 TSPY8P0CW00 308 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 ALAS1P13196 640 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 OAZ1P54368 228 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 IKQ13123 557 aaPredicted RBP12.28□□□□□ -0.44
GPNMB-206ENST00000465673 RAB30Q15771 203 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 TAPT1Q6NXT6 567 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 MICALL1Q8N3F8 863 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 NEDD1Q8NHV4 660 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 NOC4LQ9BVI4 516 aaKnown RBP12.28□□□□□ -0.44
GPNMB-206ENST00000465673 SLC28A3Q9HAS3 691 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 MTMR7Q9Y216 660 aa12.28□□□□□ -0.44
GPNMB-206ENST00000465673 GBF1Q92538 1859 aa12.27□□□□□ -0.44
GPNMB-206ENST00000465673 PATL2C9JE40 543 aaKnown RBP12.27□□□□□ -0.45
GPNMB-206ENST00000465673 STAT2P52630 851 aa12.27□□□□□ -0.45
GPNMB-206ENST00000465673 MRPS5P82675 430 aaKnown RBP12.27□□□□□ -0.45
GPNMB-206ENST00000465673 TFF2Q03403 129 aa12.27□□□□□ -0.45
GPNMB-206ENST00000465673 STAG1Q8WVM7 1258 aa12.27□□□□□ -0.45
GPNMB-206ENST00000465673 UHRF1Q96T88 793 aaPredicted RBP12.27□□□□□ -0.45
GPNMB-206ENST00000465673 AP5M1Q9H0R1 490 aa12.27□□□□□ -0.45
GPNMB-206ENST00000465673 CHD7Q9P2D1 2997 aa12.27□□□□□ -0.45
GPNMB-206ENST00000465673 ZBBXA8MT70 800 aa12.26□□□□□ -0.45
GPNMB-206ENST00000465673 CYP2C9P11712 490 aa12.26□□□□□ -0.45
GPNMB-206ENST00000465673 SLC1A4P43007 532 aa12.26□□□□□ -0.45
GPNMB-206ENST00000465673 TTLL4Q14679 1199 aa12.26□□□□□ -0.45
GPNMB-206ENST00000465673 KIAA1211Q6ZU35 1233 aa12.26□□□□□ -0.45
GPNMB-206ENST00000465673 OTUD7AQ8TE49 926 aaPredicted RBP12.26□□□□□ -0.45
GPNMB-206ENST00000465673 CERS4Q9HA82 394 aa12.26□□□□□ -0.45
GPNMB-206ENST00000465673 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
GPNMB-206ENST00000465673 TRMT13Q9NUP7 481 aaKnown RBP12.26□□□□□ -0.45
GPNMB-206ENST00000465673 CYP39A1Q9NYL5 469 aa12.26□□□□□ -0.45
GPNMB-206ENST00000465673 PRR12Q9ULL5 1215 aa12.26□□□□□ -0.45
GPNMB-206ENST00000465673 TCF20Q9UGU0 1960 aaKnown RBP12.25□□□□□ -0.45
GPNMB-206ENST00000465673 NCOR1O75376 2440 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 ASB14A6NK59 587 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 FOXP2O15409 715 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 CABYRO75952 493 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 GNAT2P19087 354 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 CTDSPL2Q05D32 466 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 PPARAQ07869 468 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 PPP2R2DQ66LE6 453 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 KRT40Q6A162 431 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 IQSEC1Q6DN90 963 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 TTBK2Q6IQ55 1244 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 NSMFQ6X4W1 530 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 DEFB128Q7Z7B8 93 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 FAM160B2Q86V87 743 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 CHURC1Q8WUH1 139 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 GMCL1Q96IK5 515 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 ZNF287Q9HBT7 754 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 STX8Q9UNK0 236 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 SLC4A7Q9Y6M7 1214 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 PLIN4Q96Q06 1357 aa12.25□□□□□ -0.45
GPNMB-206ENST00000465673 BDP1A6H8Y1 2624 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 LRRC37A2A6NM11 1700 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 ARHGEF15O94989 841 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 FDX1P10109 184 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 SLC16A2P36021 539 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 KCNQ1P51787 676 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 PDE4BQ07343 736 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 BAATQ14032 418 aaPredicted RBP12.24□□□□□ -0.45
GPNMB-206ENST00000465673 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 NAPBQ9H115 298 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 ALDH8A1Q9H2A2 487 aaPredicted RBP12.24□□□□□ -0.45
GPNMB-206ENST00000465673 MTIF3Q9H2K0 278 aaKnown RBP12.24□□□□□ -0.45
GPNMB-206ENST00000465673 DCTPP1Q9H773 170 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 CCPG1Q9ULG6 757 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 SYNPO2Q9UMS6 1093 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 REV3LO60673 3130 aa12.24□□□□□ -0.45
GPNMB-206ENST00000465673 EPOPA6NHQ4 379 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms