RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 PIDD1Q9HB75 910 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 RRAGCQ9HB90 399 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 LRRC4BQ9NT99 713 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 PLEKHG1Q9ULL1 1385 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 PPLO60437 1756 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 KRBA1A5PL33 1030 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 MEGF11A6BM72 1044 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 RFPL3O75679 317 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 TIAF1O95411 115 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 C6orf222P0C671 652 aaPredicted RBP6.09□□□□□ -1.43
CDK13-203ENST00000465643 CD247P20963 164 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 ZC3H12BQ5HYM0 836 aaKnown RBP6.09□□□□□ -1.43
CDK13-203ENST00000465643 CT47A1Q5JQC4 288 aaPredicted RBP6.09□□□□□ -1.43
CDK13-203ENST00000465643 NBPF12Q5TAG4 269 aaPredicted RBP6.09□□□□□ -1.43
CDK13-203ENST00000465643 NSMFQ6X4W1 530 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 LRRTM3Q86VH5 581 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.09□□□□□ -1.43
CDK13-203ENST00000465643 SMYD4Q8IYR2 804 aaPredicted RBP6.09□□□□□ -1.43
CDK13-203ENST00000465643 SLC7A14Q8TBB6 771 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 FOXQ1Q9C009 403 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.09□□□□□ -1.43
CDK13-203ENST00000465643 RNF208Q9H0X6 261 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 TMX1Q9H3N1 280 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 SUGCTQ9HAC7 445 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 CYP4F12Q9HCS2 524 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 POLR1AO95602 1720 aaPredicted RBP6.09□□□□□ -1.43
CDK13-203ENST00000465643 MYOM2P54296 1465 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 ALX3O95076 343 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 SHISA2Q6UWI4 295 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 CDH24Q86UP0 819 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 SCUBE1Q8IWY4 988 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 DTWD1Q8N5C7 304 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 SMG8Q8ND04 991 aaKnown RBP6.09□□□□□ -1.43
CDK13-203ENST00000465643 BVESQ8NE79 360 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 DNAJB8Q8NHS0 232 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 VWCEQ96DN2 955 aa6.09□□□□□ -1.43
CDK13-203ENST00000465643 IFT172Q9UG01 1749 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 SNRPNP63162 240 aaKnown RBP6.08□□□□□ -1.44
CDK13-203ENST00000465643 SNW1Q13573 536 aaKnown RBP6.08□□□□□ -1.44
CDK13-203ENST00000465643 AUHQ13825 339 aaKnown RBP6.08□□□□□ -1.44
CDK13-203ENST00000465643 ZNF460Q14592 562 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 FNDC3BQ53EP0 1204 aaKnown RBP6.08□□□□□ -1.44
CDK13-203ENST00000465643 FGD2Q7Z6J4 655 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 FMNL3Q8IVF7 1028 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 MRGPRX3Q96LB0 322 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 GSX1Q9H4S2 264 aaPredicted RBP6.08□□□□□ -1.44
CDK13-203ENST00000465643 SLC52A2Q9HAB3 445 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 AKT3Q9Y243 479 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 CCDC163A0A0D9SF12 145 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 LRRN2O75325 713 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 DNAJC8O75937 253 aaPredicted RBP6.08□□□□□ -1.44
CDK13-203ENST00000465643 RAB6AP20340 208 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.08□□□□□ -1.44
CDK13-203ENST00000465643 KREMEN1Q96MU8 473 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 IPO9Q96P70 1041 aaKnown RBP6.08□□□□□ -1.44
CDK13-203ENST00000465643 GP6Q9HCN6 339 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 NDOR1Q9UHB4 597 aa6.08□□□□□ -1.44
CDK13-203ENST00000465643 STRCQ7RTU9 1775 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 IQGAP1P46940 1657 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 KCNH1O95259 989 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 FGFR1P11362 822 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 CAP2P40123 477 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 PPP2R5DQ14738 602 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 PRSS53Q2L4Q9 553 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 LHFPL2Q6ZUX7 228 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 C7orf61Q8IZ16 206 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 LEO1Q8WVC0 666 aaPredicted RBP6.07□□□□□ -1.44
CDK13-203ENST00000465643 SMARCC1Q92922 1105 aaPredicted RBP6.07□□□□□ -1.44
CDK13-203ENST00000465643 MIPEPQ99797 713 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 PLVAPQ9BX97 442 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 TRIM39Q9HCM9 518 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 MED14O60244 1454 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 PIK3C2GO75747 1445 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 PRAG1Q86YV5 1406 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 DYNC1LI2O43237 492 aaPredicted RBP6.07□□□□□ -1.44
CDK13-203ENST00000465643 DLX3O60479 287 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 NAT2P11245 290 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 ZNF445P59923 1031 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 NBPF8Q3BBV2 869 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 TMEM132EQ6IEE7 984 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 BRAPQ7Z569 592 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 AFAP1L2Q8N4X5 818 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 KCT2Q8NC54 265 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 IRF7Q92985 503 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 NOL6Q9H6R4 1146 aaKnown RBP6.07□□□□□ -1.44
CDK13-203ENST00000465643 TYW1Q9NV66 732 aaKnown RBP6.07□□□□□ -1.44
CDK13-203ENST00000465643 STK26Q9P289 416 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 CGGBP1Q9UFW8 167 aaPredicted RBP6.07□□□□□ -1.44
CDK13-203ENST00000465643 SFMBT1Q9UHJ3 866 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 MINPP1Q9UNW1 487 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 CEP131Q9UPN4 1083 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 EMC9Q9Y3B6 208 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 DAGLAQ9Y4D2 1042 aa6.07□□□□□ -1.44
CDK13-203ENST00000465643 CNTNAP4Q9C0A0 1308 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 PPM1BO75688 479 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 SLITRK5O94991 958 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 ZEB1P37275 1124 aaPredicted RBP6.06□□□□□ -1.44
CDK13-203ENST00000465643 PREPP48147 710 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 SUMO1P63165 101 aaKnown RBP6.06□□□□□ -1.44
CDK13-203ENST00000465643 PCBP1Q15365 356 aaKnown RBP eCLIP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms