RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 CLEC10AQ8IUN9 316 aa9.5□□□□□ -0.89
UBE4B-205ENST00000465408 FAM200AQ8TCP9 573 aa9.5□□□□□ -0.89
UBE4B-205ENST00000465408 CEP95Q96GE4 821 aa9.5□□□□□ -0.89
UBE4B-205ENST00000465408 DNAJC25Q9H1X3 360 aa9.5□□□□□ -0.89
UBE4B-205ENST00000465408 CPVLQ9H3G5 476 aa9.5□□□□□ -0.89
UBE4B-205ENST00000465408 CBX8Q9HC52 389 aa9.5□□□□□ -0.89
UBE4B-205ENST00000465408 CFAP54Q96N23 3096 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 BAHCC1Q9P281 2608 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 TESPA1A2RU30 521 aaPredicted RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 PALM3A6NDB9 673 aaPredicted RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 WNT7AO00755 349 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 AP5Z1O43299 807 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 ZNF202O95125 648 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 TOP1P11387 765 aaKnown RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 CTGFP29279 349 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 SHMT1P34896 483 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 GNAQP50148 359 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 PRMT2P55345 433 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 FKBP1AP62942 108 aaKnown RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 PLCB2Q00722 1185 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 GRIN1Q05586 938 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 GABPAQ06546 454 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 TAF1CQ15572 869 aaPredicted RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 STX1AQ16623 288 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 TMEM31Q5JXX7 168 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 SPECC1Q5M775 1068 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 RESP18Q5W5W9 173 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 C11orf57Q6ZUT1 292 aaPredicted RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 LUZP1Q86V48 1076 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 LRRC47Q8N1G4 583 aaKnown RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 FAM43AQ8N2R8 423 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 ATXN2LQ8WWM7 1075 aaKnown RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 TNFRSF25Q93038 417 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 ZDHHC15Q96MV8 337 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 SDF4Q9BRK5 362 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 BRMS1Q9HCU9 246 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 MYOZ2Q9NPC6 264 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 FBXO2Q9UK22 296 aaPredicted RBP9.49□□□□□ -0.89
UBE4B-205ENST00000465408 SCN9AQ15858 1988 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 CDK5RAP2Q96SN8 1893 aa9.49□□□□□ -0.89
UBE4B-205ENST00000465408 IGKV6D-41A0A0C4DH26 115 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 TRIM75PA6NK02 468 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 KLRF2D3W0D1 207 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 MPHOSPH10O00566 681 aaKnown RBP9.48□□□□□ -0.89
UBE4B-205ENST00000465408 CYTH3O43739 400 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 ADCY5O95622 1261 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 TFRCP02786 760 aaKnown RBP9.48□□□□□ -0.89
UBE4B-205ENST00000465408 VIL1P09327 827 aaKnown RBP9.48□□□□□ -0.89
UBE4B-205ENST00000465408 PARP1P09874 1014 aaKnown RBP9.48□□□□□ -0.89
UBE4B-205ENST00000465408 SYKP43405 635 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-205ENST00000465408 TCP10Q12799 353 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 NBPF9Q3BBW0 867 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 TTC38Q5R3I4 469 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 WWC2Q6AWC2 1192 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 USP17L2Q6R6M4 530 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 HEATR3Q7Z4Q2 680 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 ZFYVE28Q9HCC9 887 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 BIN2Q9UBW5 565 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-205ENST00000465408 FAM198AQ9UFP1 575 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 SWAP70Q9UH65 585 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 NOL7Q9UMY1 257 aaKnown RBP9.48□□□□□ -0.89
UBE4B-205ENST00000465408 HPSEQ9Y251 543 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 FRMPD2Q68DX3 1309 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-205ENST00000465408 PLIN4Q96Q06 1357 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 ZDBF2Q9HCK1 2354 aa9.48□□□□□ -0.89
UBE4B-205ENST00000465408 FAM237AA0A1B0GTK4 181 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 GNRH1P01148 92 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 PTMAP06454 111 aaKnown RBP9.47□□□□□ -0.89
UBE4B-205ENST00000465408 PTPREP23469 700 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 ZNF165P49910 485 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 UBXN2AP68543 259 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 HDLBPQ00341 1268 aaKnown RBP9.47□□□□□ -0.89
UBE4B-205ENST00000465408 ATP2B2Q01814 1243 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 KIF22Q14807 665 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 ZNF174Q15697 407 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 SHROOM1Q2M3G4 852 aaPredicted RBP9.47□□□□□ -0.89
UBE4B-205ENST00000465408 CFAP100Q494V2 611 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 PIK3AP1Q6ZUJ8 805 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 SH3BP5LQ7L8J4 393 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 NECAB2Q7Z6G3 386 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 HOMER1Q86YM7 354 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 RAET1EQ8TD07 263 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 RASGRP4Q8TDF6 673 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 LZTS2Q9BRK4 669 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 UBA5Q9GZZ9 404 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 TDRD3Q9H7E2 651 aaKnown RBP9.47□□□□□ -0.89
UBE4B-205ENST00000465408 VAT1LQ9HCJ6 419 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 GPCPD1Q9NPB8 672 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 C11orf16Q9NQ32 467 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.47□□□□□ -0.89
UBE4B-205ENST00000465408 MTMR4Q9NYA4 1195 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 CLIP2Q9UDT6 1046 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 SRRDQ9UH36 339 aa9.47□□□□□ -0.89
UBE4B-205ENST00000465408 SERPINB13Q9UIV8 391 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms