RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 PRDM14Q9GZV8 571 aa7.39□□□□□ -1.23
CACNA1C-223ENST00000465278 OSBPL2Q9H1P3 480 aa7.39□□□□□ -1.23
CACNA1C-223ENST00000465278 ZC3H7BQ9UGR2 993 aaKnown RBP7.39□□□□□ -1.23
CACNA1C-223ENST00000465278 ZNF451Q9Y4E5 1061 aa7.39□□□□□ -1.23
CACNA1C-223ENST00000465278 ATP10DQ9P241 1426 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 FAM221BA6H8Z2 402 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 K7ELQ4 463 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 RNF4P78317 190 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 SERINC3Q13530 473 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 NCAPHQ15003 741 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 NKPD1Q17RQ9 610 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 HEATR6Q6AI08 1181 aaKnown RBP7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 MRM1Q6IN84 353 aaKnown RBP7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 TMC3Q7Z5M5 1100 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 C7orf61Q8IZ16 206 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 MFSD4AQ8N468 514 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 DTWD2Q8NBA8 298 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 BRF1Q92994 677 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 SRPK1Q96SB4 655 aaKnown RBP7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 KCNH3Q9ULD8 1083 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 MINPP1Q9UNW1 487 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 CAPN6Q9Y6Q1 641 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 LAMC1P11047 1609 aa7.38□□□□□ -1.23
CACNA1C-223ENST00000465278 ARHGAP5Q13017 1502 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 MIA2Q96PC5 1412 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 EPHX1P07099 455 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 FOSL1P15407 271 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 ITGB7P26010 798 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 KIR3DL1P43629 444 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 NOL9Q5SY16 702 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 HSPA12BQ96MM6 686 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 HAUS7Q99871 368 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 PIF1Q9H611 641 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 ZSWIM5Q9P217 1185 aa7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 CDK11AQ9UQ88 783 aaPredicted RBP7.37□□□□□ -1.23
CACNA1C-223ENST00000465278 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 MEIS1O00470 390 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 ZNF865P0CJ78 1059 aaPredicted RBP7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 KCNA6P17658 529 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 CD247P20963 164 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 TCEAL1Q15170 157 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 ANKRD39Q53RE8 183 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 UBE2FQ969M7 185 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 PPP1R14AQ96A00 147 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 APBA2Q99767 749 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 LGR4Q9BXB1 951 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 DUSP15Q9H1R2 295 aaPredicted RBP7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 GFOD1Q9NXC2 390 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 SUSD2Q9UGT4 822 aa7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 INO80Q9ULG1 1556 aaPredicted RBP7.36□□□□□ -1.23
CACNA1C-223ENST00000465278 PARD3Q8TEW0 1356 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 TET3O43151 1660 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 SHISA3A0PJX4 238 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 SHOXO15266 292 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 PDPK1O15530 556 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 CBFA2T2O43439 604 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 MED26O95402 600 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 CEACAM5P06731 702 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 SV2CQ496J9 727 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 EFCAB2Q5VUJ9 269 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 ADCY4Q8NFM4 1077 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 NETO1Q8TDF5 533 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 SMARCC1Q92922 1105 aaPredicted RBP7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 COX4I2Q96KJ9 171 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 DEPDC7Q96QD5 511 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 CCDC113Q9H0I3 377 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 ASCC2Q9H1I8 757 aaPredicted RBP7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 GP6Q9HCN6 339 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 PCDHB12Q9Y5F1 795 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 ST14Q9Y5Y6 855 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 ARHGAP35Q9NRY4 1499 aa7.35□□□□□ -1.23
CACNA1C-223ENST00000465278 TMEM131LA2VDJ0 1609 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 USP19O94966 1318 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 EFCAB6Q5THR3 1501 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 PLEKHD1A6NEE1 506 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 H3BS24 57 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 SSTR4P31391 388 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 ZNF445P59923 1031 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 BNIP3Q12983 259 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 NMIQ13287 307 aaPredicted RBP7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 PPP2R5DQ14738 602 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 EZH2Q15910 746 aaKnown RBP7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 CLEC16AQ2KHT3 1053 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 DNAJC7Q99615 494 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 KLHL25Q9H0H3 589 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 SNTG2Q9NY99 539 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 PFDN2Q9UHV9 154 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 SUGT1Q9Y2Z0 365 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 MSRB2Q9Y3D2 182 aa7.34□□□□□ -1.23
CACNA1C-223ENST00000465278 PREX2Q70Z35 1606 aa7.34□□□□□ -1.24
CACNA1C-223ENST00000465278 USP32Q8NFA0 1604 aa7.34□□□□□ -1.24
CACNA1C-223ENST00000465278 ANKRD34BA5PLL1 514 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 SUSD5O60279 629 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 RGS19P49795 217 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 C22orf34Q6ZV56 151 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 BRINP3Q76B58 766 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 SPATC1Q76KD6 591 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 EEPD1Q7L9B9 569 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 LRRN4CLQ8ND94 238 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms