RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 PLXNA3P51805 1871 aa15.13■□□□□ 0.01
SNX17-205ENST00000464279 WDR5P61964 334 aaKnown RBP15.13■□□□□ 0.01
SNX17-205ENST00000464279 TNFAIP2Q03169 654 aa15.13■□□□□ 0.01
SNX17-205ENST00000464279 SMAD2Q15796 467 aaKnown RBP15.13■□□□□ 0.01
SNX17-205ENST00000464279 FBXO22Q8NEZ5 403 aa15.13■□□□□ 0.01
SNX17-205ENST00000464279 MEIS3Q99687 375 aa15.13■□□□□ 0.01
SNX17-205ENST00000464279 AP5M1Q9H0R1 490 aa15.13■□□□□ 0.01
SNX17-205ENST00000464279 ARHGEF10LQ9HCE6 1279 aa15.13■□□□□ 0.01
SNX17-205ENST00000464279 FBXO28Q9NVF7 368 aa15.13■□□□□ 0.01
SNX17-205ENST00000464279 SCN5AQ14524 2016 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 MYH1P12882 1939 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.12■□□□□ 0.01
SNX17-205ENST00000464279 H0Y858 1186 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 PITPNM1O00562 1244 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 UQCRFS1P1P0C7P4 283 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
SNX17-205ENST00000464279 VCPP55072 806 aaKnown RBP15.12■□□□□ 0.01
SNX17-205ENST00000464279 COL19A1Q14993 1142 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 TMCO2Q7Z6W1 182 aaPredicted RBP15.12■□□□□ 0.01
SNX17-205ENST00000464279 CERS3Q8IU89 383 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 REPS2Q8NFH8 660 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 PANK1Q8TE04 598 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 CRBNQ96SW2 442 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 RAD9AQ99638 391 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 TEX13BQ9BXU2 312 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 TLR9Q9NR96 1032 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 PPP1R9AQ9ULJ8 1098 aa15.12■□□□□ 0.01
SNX17-205ENST00000464279 COL11A1P12107 1806 aaPredicted RBP15.12■□□□□ 0.01
SNX17-205ENST00000464279 TPRP12270 2363 aaKnown RBP15.11■□□□□ 0.01
SNX17-205ENST00000464279 PARP14Q460N5 1801 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 BAHCC1Q9P281 2608 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 IQCF3P0C7M6 154 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 MS4A1P11836 297 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 SNRNP48Q6IEG0 339 aaKnown RBP15.11■□□□□ 0.01
SNX17-205ENST00000464279 TMEM179Q6ZVK1 233 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 RETREG2Q8NC44 543 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 BANK1Q8NDB2 785 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 KATNBL1Q9H079 304 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 CLDND1Q9NY35 253 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 GNEQ9Y223 722 aaKnown RBP15.11■□□□□ 0.01
SNX17-205ENST00000464279 TMX2Q9Y320 296 aa15.11■□□□□ 0.01
SNX17-205ENST00000464279 SIP14410 1827 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 GJB5O95377 273 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 GNAI3P08754 354 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 PLCD1P51178 756 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 ZXDAP98168 799 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 ICA1Q05084 483 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 TCEAL5Q5H9L2 206 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 CCDC144CPQ8IYA2 1237 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNX17-205ENST00000464279 FGD4Q96M96 766 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 SNRKQ9NRH2 765 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 CHD8Q9HCK8 2581 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 TANC1Q9C0D5 1861 aa15.1■□□□□ 0.01
SNX17-205ENST00000464279 MYO15AQ9UKN7 3530 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 IGSF3O75054 1194 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 KDM4AO75164 1064 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 AVPR2P30518 371 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 NBL1P41271 181 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 DEFB103AP81534 67 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 GABPAQ06546 454 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 CLEC10AQ8IUN9 316 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 MIGA1Q8NAN2 632 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 HDAC5Q9UQL6 1122 aa15.09■□□□□ 0.01
SNX17-205ENST00000464279 PTPRSQ13332 1948 aa15.08■□□□□ 0
SNX17-205ENST00000464279 STXBP3O00186 592 aa15.08■□□□□ 0
SNX17-205ENST00000464279 DYNC1LI2O43237 492 aaPredicted RBP15.08■□□□□ 0
SNX17-205ENST00000464279 CYP7A1P22680 504 aa15.08■□□□□ 0
SNX17-205ENST00000464279 NUBP1P53384 320 aa15.08■□□□□ 0
SNX17-205ENST00000464279 RRP1P56182 461 aaKnown RBP15.08■□□□□ 0
SNX17-205ENST00000464279 RPAINQ86UA6 219 aa15.08■□□□□ 0
SNX17-205ENST00000464279 ANKRD35Q8N283 1001 aa15.08■□□□□ 0
SNX17-205ENST00000464279 C17orf80Q9BSJ5 609 aa15.08■□□□□ 0
SNX17-205ENST00000464279 NSUN3Q9H649 340 aaKnown RBP15.08■□□□□ 0
SNX17-205ENST00000464279 PKD1L2Q7Z442 2459 aa15.08■□□□□ 0
SNX17-205ENST00000464279 MBTPS2O43462 519 aa15.07■□□□□ 0
SNX17-205ENST00000464279 NCK2O43639 380 aa15.07■□□□□ 0
SNX17-205ENST00000464279 POLR3DP05423 398 aaPredicted RBP15.07■□□□□ 0
SNX17-205ENST00000464279 SIGLEC14Q08ET2 396 aa15.07■□□□□ 0
SNX17-205ENST00000464279 BFSP2Q13515 415 aa15.07■□□□□ 0
SNX17-205ENST00000464279 CLUL1Q15846 466 aa15.07■□□□□ 0
SNX17-205ENST00000464279 LRRFIP1Q32MZ4 808 aaKnown RBP15.07■□□□□ 0
SNX17-205ENST00000464279 NBPF20Q3BBV1 942 aa15.07■□□□□ 0
SNX17-205ENST00000464279 C20orf194Q5TEA3 1177 aa15.07■□□□□ 0
SNX17-205ENST00000464279 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.07■□□□□ 0
SNX17-205ENST00000464279 DGLUCYQ7Z3D6 616 aa15.07■□□□□ 0
SNX17-205ENST00000464279 CNTNAP3BQ96NU0 1288 aa15.07■□□□□ 0
SNX17-205ENST00000464279 CNTNAP3Q9BZ76 1288 aa15.07■□□□□ 0
SNX17-205ENST00000464279 COG6Q9Y2V7 657 aa15.07■□□□□ 0
SNX17-205ENST00000464279 RIPK3Q9Y572 518 aa15.07■□□□□ 0
SNX17-205ENST00000464279 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.07■□□□□ 0
SNX17-205ENST00000464279 MCM3APO60318 1980 aa15.06■□□□□ 0
SNX17-205ENST00000464279 CYP2E1P05181 493 aaPredicted RBP15.06■□□□□ 0
SNX17-205ENST00000464279 SMPD1P17405 629 aa15.06■□□□□ 0
SNX17-205ENST00000464279 PTGS1P23219 599 aa15.06■□□□□ 0
SNX17-205ENST00000464279 SMAD4Q13485 552 aaKnown RBP15.06■□□□□ 0
SNX17-205ENST00000464279 SIAH1Q8IUQ4 282 aa15.06■□□□□ 0
SNX17-205ENST00000464279 ADSSL1Q8N142 457 aa15.06■□□□□ 0
SNX17-205ENST00000464279 ACACBO00763 2458 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms