RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 SYN1P17600 705 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 CNGA1P29973 690 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 MCM5P33992 734 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 SLC4A3P48751 1232 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 WTAPQ15007 396 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 PWP2Q15269 919 aaKnown RBP8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 CREB3L3Q68CJ9 461 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 STOX1Q6ZVD7 989 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 MB21D2Q8IYB1 491 aaPredicted RBP8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 TMTC2Q8N394 836 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 RGS22Q8NE09 1264 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 TRPV1Q8NER1 839 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 CHMP4CQ96CF2 233 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 MAP3K14Q99558 947 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 A1CFQ9NQ94 594 aaKnown RBP8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 HOMER2Q9NSB8 354 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 CNPY2Q9Y2B0 182 aa8.68□□□□□ -1.02
THUMPD3-208ENST00000464045 ASB14A6NK59 587 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 POTEB2H3BUK9 544 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 DNM1LO00429 736 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 EPB41L2O43491 1005 aaKnown RBP8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 AKR1A1P14550 325 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 MNX1P50219 401 aaPredicted RBP8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 TRAF1Q13077 416 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 KRT32Q14532 448 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 TSGA10IPQ3SY00 556 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 TMEM67Q5HYA8 995 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 CATIPQ7Z7H3 387 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 ADGRF4Q8IZF3 695 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 FAM133AQ8N9E0 248 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 ARRDC4Q8NCT1 418 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 SLC17A8Q8NDX2 589 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 IGDCC4Q8TDY8 1250 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 TMEM87BQ96K49 555 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 C11orf49Q9H6J7 331 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 CYP39A1Q9NYL5 469 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 TAF6LQ9Y6J9 622 aa8.67□□□□□ -1.02
THUMPD3-208ENST00000464045 ABCB11O95342 1321 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 PALM3A6NDB9 673 aaPredicted RBP8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 POTEMA6NI47 508 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 KLRF2D3W0D1 207 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 PRC1O43663 620 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 DDAH1O94760 285 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 REC8O95072 547 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 SNAI1O95863 264 aaPredicted RBP8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 ZNF865P0CJ78 1059 aaPredicted RBP8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 GOLGA8HP0CJ92 632 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 RARBP10826 455 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 COL6A1P12109 1028 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 LIFRP42702 1097 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 ANTXR2P58335 489 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 SNAP25P60880 206 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 TROAPQ12815 778 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 GRM4Q14833 912 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 CDC37Q16543 378 aaPredicted RBP8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 MUM1L1Q5H9M0 696 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 CLEC4DQ8WXI8 215 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 MTMR8Q96EF0 704 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 FGD4Q96M96 766 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 UBA5Q9GZZ9 404 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 ABHD16BQ9H3Z7 469 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 LY9Q9HBG7 655 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 ADD3Q9UEY8 706 aaKnown RBP8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 MAD2L2Q9UI95 211 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 FAM184BQ9ULE4 1060 aa8.66□□□□□ -1.02
THUMPD3-208ENST00000464045 SOWAHBA6NEL2 793 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 KBTBD13C9JR72 458 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 NFIBO00712 420 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 SH2B2O14492 632 aaPredicted RBP8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 HMGB1P09429 215 aaKnown RBP8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 CALM1P0DP23 149 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 CALM2P0DP24 149 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 CALM3P0DP25 149 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 SMARCA1P28370 1054 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 KIF5BP33176 963 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 CNTN2Q02246 1040 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 ACVR2BQ13705 512 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 PRAMEF19Q5SWL8 479 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 NSMFQ6X4W1 530 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 RNF207Q6ZRF8 634 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 Q7L0L9 218 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 ARMCX2Q7L311 632 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 CHST3Q7LGC8 479 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 FBXO11Q86XK2 927 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 MCF2L2Q86YR7 1114 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 CCDC144CPQ8IYA2 1237 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 SAMD3Q8N6K7 520 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 DNERQ8NFT8 737 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 MORC4Q8TE76 937 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 KCNB2Q92953 911 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 MPHOSPH6Q99547 160 aaKnown RBP8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 LZTS2Q9BRK4 669 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 PRO3102Q9H379 93 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 RIOX1Q9H6W3 641 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 JMJD4Q9H9V9 463 aa8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 MRPL11Q9Y3B7 192 aaKnown RBP8.65□□□□□ -1.02
THUMPD3-208ENST00000464045 UNC80Q8N2C7 3258 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 PTPDC1A2A3K4 754 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 CCDC69A6NI79 296 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms