RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 PDE6AP16499 860 aa13.3□□□□□ -0.28
SSR3-202ENST00000463503 ATP2A2P16615 1042 aaKnown RBP13.3□□□□□ -0.28
SSR3-202ENST00000463503 BEX3Q00994 111 aa13.3□□□□□ -0.28
SSR3-202ENST00000463503 SNRNP48Q6IEG0 339 aaKnown RBP13.3□□□□□ -0.28
SSR3-202ENST00000463503 LCORLQ8N3X6 602 aa13.3□□□□□ -0.28
SSR3-202ENST00000463503 OTUD7AQ8TE49 926 aaPredicted RBP13.3□□□□□ -0.28
SSR3-202ENST00000463503 AGBL1Q96MI9 1066 aa13.3□□□□□ -0.28
SSR3-202ENST00000463503 HAUS7Q99871 368 aa13.3□□□□□ -0.28
SSR3-202ENST00000463503 ABHD16BQ9H3Z7 469 aa13.3□□□□□ -0.28
SSR3-202ENST00000463503 MYO15AQ9UKN7 3530 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.29□□□□□ -0.28
SSR3-202ENST00000463503 PI4K2BG5E9Z4 385 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 PTGS1P23219 599 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 TTLL4Q14679 1199 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 CXCL17Q6UXB2 119 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 ARMCX2Q7L311 632 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 VTI1AQ96AJ9 217 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 TRPV6Q9H1D0 765 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 CERS4Q9HA82 394 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 SPC25Q9HBM1 224 aa13.29□□□□□ -0.28
SSR3-202ENST00000463503 ATP2A1O14983 1001 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 GTPBP6O43824 516 aaPredicted RBP13.28□□□□□ -0.28
SSR3-202ENST00000463503 LPXNO60711 386 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 SPRED2Q7Z698 418 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 CCDC144CPQ8IYA2 1237 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 HLA-CQ95604 372 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 DDX11Q96FC9 970 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 SCLYQ96I15 445 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 SNX27Q96L92 541 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 NUP88Q99567 741 aaPredicted RBP13.28□□□□□ -0.28
SSR3-202ENST00000463503 SLF1Q9BQI6 1058 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.28□□□□□ -0.28
SSR3-202ENST00000463503 GNEQ9Y223 722 aaKnown RBP13.28□□□□□ -0.28
SSR3-202ENST00000463503 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
SSR3-202ENST00000463503 CYP2D7A0A087X1C5 515 aa13.27□□□□□ -0.29
SSR3-202ENST00000463503 ZBBXA8MT70 800 aa13.27□□□□□ -0.29
SSR3-202ENST00000463503 PRR33A8MZF0 331 aa13.27□□□□□ -0.29
SSR3-202ENST00000463503 TAP1Q03518 808 aa13.27□□□□□ -0.29
SSR3-202ENST00000463503 ITGA7Q13683 1181 aa13.27□□□□□ -0.29
SSR3-202ENST00000463503 TTF1Q15361 905 aaPredicted RBP13.27□□□□□ -0.29
SSR3-202ENST00000463503 TMEM67Q5HYA8 995 aa13.27□□□□□ -0.29
SSR3-202ENST00000463503 C16orf86Q6ZW13 317 aa13.27□□□□□ -0.29
SSR3-202ENST00000463503 GOPCQ9HD26 462 aa13.27□□□□□ -0.29
SSR3-202ENST00000463503 MICAL3Q7RTP6 2002 aa13.27□□□□□ -0.29
SSR3-202ENST00000463503 PRKAB2O43741 272 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 CABYRO75952 493 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 CDK8P49336 464 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 MRE11P49959 708 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 TTC22Q5TAA0 569 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 SLC9C2Q5TAH2 1124 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 C12orf60Q5U649 245 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 TLK2Q86UE8 772 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 KMT2EQ8IZD2 1858 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 CCDC17Q96LX7 622 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 BOLA2Q9H3K6 86 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 ARMT1Q9H993 441 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 KANSL2Q9H9L4 492 aa13.26□□□□□ -0.29
SSR3-202ENST00000463503 PFKMP08237 780 aa13.25□□□□□ -0.29
SSR3-202ENST00000463503 PSMC6P62333 389 aa13.25□□□□□ -0.29
SSR3-202ENST00000463503 GRB10Q13322 594 aa13.25□□□□□ -0.29
SSR3-202ENST00000463503 FSCN1Q16658 493 aaKnown RBP13.25□□□□□ -0.29
SSR3-202ENST00000463503 RPUSD2Q8IZ73 545 aaKnown RBP13.25□□□□□ -0.29
SSR3-202ENST00000463503 ARNTL2Q8WYA1 636 aa13.25□□□□□ -0.29
SSR3-202ENST00000463503 SLC9A7Q96T83 725 aa13.25□□□□□ -0.29
SSR3-202ENST00000463503 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
SSR3-202ENST00000463503 SPTBN4Q9H254 2564 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 CNTN2Q02246 1040 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 NHLH1Q02575 133 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 TNFAIP2Q03169 654 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 BMP2KLQ5H9B9 411 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 FAM133AQ8N9E0 248 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 EVI5LQ96CN4 794 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 SEZ6LQ9BYH1 1024 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 ALDH8A1Q9H2A2 487 aaPredicted RBP13.24□□□□□ -0.29
SSR3-202ENST00000463503 SLC38A10Q9HBR0 1119 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 TRMT13Q9NUP7 481 aaKnown RBP13.24□□□□□ -0.29
SSR3-202ENST00000463503 DDX49Q9Y6V7 483 aaKnown RBP13.24□□□□□ -0.29
SSR3-202ENST00000463503 RALGAPA2Q2PPJ7 1873 aa13.24□□□□□ -0.29
SSR3-202ENST00000463503 RAD21O60216 631 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 MBD4O95243 580 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 NDUFB10O96000 172 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 SMPD1P17405 629 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 TMEM63BQ5T3F8 832 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 TSHZ3Q63HK5 1081 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 HERC6Q8IVU3 1022 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 CPXCR1Q8N123 301 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 ANKRD35Q8N283 1001 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 KBTBD3Q8NAB2 608 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 PRPF38AQ8NAV1 312 aaKnown RBP13.23□□□□□ -0.29
SSR3-202ENST00000463503 RAVER2Q9HCJ3 691 aaKnown RBP13.23□□□□□ -0.29
SSR3-202ENST00000463503 ATP8A2Q9NTI2 1148 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 DCHS1Q96JQ0 3298 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 KIAA1217Q5T5P2 1943 aa13.23□□□□□ -0.29
SSR3-202ENST00000463503 ZDBF2Q9HCK1 2354 aa13.22□□□□□ -0.29
SSR3-202ENST00000463503 DMDP11532 3685 aa13.22□□□□□ -0.29
SSR3-202ENST00000463503 USP17L12C9JPN9 530 aa13.22□□□□□ -0.29
SSR3-202ENST00000463503 USP17L21D6R901 530 aa13.22□□□□□ -0.29
SSR3-202ENST00000463503 CYP2C9P11712 490 aa13.22□□□□□ -0.29
SSR3-202ENST00000463503 GSPT1P15170 499 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms