RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.53□□□□□ -1.2
COPS3-205ENST00000463097 MTDHQ86UE4 582 aaKnown RBP7.53□□□□□ -1.2
COPS3-205ENST00000463097 MAGEB6Q8N7X4 407 aa7.53□□□□□ -1.2
COPS3-205ENST00000463097 JPH3Q8WXH2 748 aaPredicted RBP7.53□□□□□ -1.2
COPS3-205ENST00000463097 SLC39A13Q96H72 371 aa7.53□□□□□ -1.2
COPS3-205ENST00000463097 ZFYVE21Q9BQ24 234 aa7.53□□□□□ -1.2
COPS3-205ENST00000463097 MENTQ9BUN1 341 aa7.53□□□□□ -1.2
COPS3-205ENST00000463097 RHOBTB2Q9BYZ6 727 aa7.53□□□□□ -1.2
COPS3-205ENST00000463097 MRPL18Q9H0U6 180 aaKnown RBP7.53□□□□□ -1.2
COPS3-205ENST00000463097 ACSS3Q9H6R3 686 aa7.53□□□□□ -1.2
COPS3-205ENST00000463097 PRPF3O43395 683 aaKnown RBP7.52□□□□□ -1.21
COPS3-205ENST00000463097 LRRN2O75325 713 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 FKBP9O95302 570 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 BCRP11274 1271 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 ADCYAP1R1P41586 468 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 KRT76Q01546 638 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 DSG1Q02413 1049 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 SYCP2LQ5T4T6 812 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 GPAT2Q6NUI2 795 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 RSPO2Q6UXX9 243 aaPredicted RBP7.52□□□□□ -1.21
COPS3-205ENST00000463097 FKBP9P1Q75LS8 142 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 IFNL3Q8IZI9 196 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 SMC1BQ8NDV3 1235 aa7.52□□□□□ -1.21
COPS3-205ENST00000463097 LUC7LQ9NQ29 371 aaKnown RBP7.52□□□□□ -1.21
COPS3-205ENST00000463097 K7ESF4 209 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 GAS7O60861 476 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 DGKGP49619 791 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 GPR85P60893 370 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 POU4F1Q01851 419 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 FAPQ12884 760 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 PTPN21Q16825 1174 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 SLC4A10Q6U841 1118 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 IGF2-ASQ6U949 168 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 KSR2Q6VAB6 950 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 TMC3Q7Z5M5 1100 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 PPIL6Q8IXY8 311 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 SAMD3Q8N6K7 520 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 IGSF22Q8N9C0 903 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 COPS5Q92905 334 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 PSMG3-AS1Q96PY0 264 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 MCMBPQ9BTE3 642 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 PHF20Q9BVI0 1012 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 PRDM10Q9NQV6 1147 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 CHST7Q9NS84 486 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 IP6K2Q9UHH9 426 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 RNF112Q9ULX5 631 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 ZKSCAN5Q9Y2L8 839 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 ST14Q9Y5Y6 855 aa7.51□□□□□ -1.21
COPS3-205ENST00000463097 H0Y8X5 98 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 ARVCFO00192 962 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 SIGLEC6O43699 453 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 THBDP07204 575 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 RAB6AP20340 208 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 CYP7A1P22680 504 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 LSSP48449 732 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 USP11P51784 963 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 ABCB5Q2M3G0 1257 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 ATP13A4Q4VNC1 1196 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
COPS3-205ENST00000463097 TSHZ1Q6ZSZ6 1077 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 ZC3H7AQ8IWR0 971 aaKnown RBP7.5□□□□□ -1.21
COPS3-205ENST00000463097 CBARPQ8N350 705 aaPredicted RBP7.5□□□□□ -1.21
COPS3-205ENST00000463097 GPR101Q96P66 508 aaPredicted RBP7.5□□□□□ -1.21
COPS3-205ENST00000463097 MPHOSPH6Q99547 160 aaKnown RBP7.5□□□□□ -1.21
COPS3-205ENST00000463097 ZNF700Q9H0M5 742 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 CABP5Q9NP86 173 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 CHST12Q9NRB3 414 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 GPR27Q9NS67 375 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 LUC7L2Q9Y383 392 aaKnown RBP7.5□□□□□ -1.21
COPS3-205ENST00000463097 DAGLAQ9Y4D2 1042 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 NPFFR2Q9Y5X5 522 aa7.5□□□□□ -1.21
COPS3-205ENST00000463097 WDR64B1ANS9 1081 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 TRAF5O00463 557 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 CREB3O43889 395 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 PRAMEF1O95521 474 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 BRD3Q15059 726 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 CXorf57Q6NSI4 855 aaKnown RBP7.49□□□□□ -1.21
COPS3-205ENST00000463097 DGKHQ86XP1 1220 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 AGGF1Q8N302 714 aaeCLIP7.49□□□□□ -1.21
COPS3-205ENST00000463097 NPLOC4Q8TAT6 608 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.49□□□□□ -1.21
COPS3-205ENST00000463097 FRS2Q8WU20 508 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 FUBP3Q96I24 572 aaKnown RBP eCLIP7.49□□□□□ -1.21
COPS3-205ENST00000463097 LGR6Q9HBX8 967 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 GPRC5CQ9NQ84 441 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 B4GALT6Q9UBX8 382 aa7.49□□□□□ -1.21
COPS3-205ENST00000463097 C2orf71A6NGG8 1288 aa7.48□□□□□ -1.21
COPS3-205ENST00000463097 STXBP3O00186 592 aa7.48□□□□□ -1.21
COPS3-205ENST00000463097 MEIS1O00470 390 aa7.48□□□□□ -1.21
COPS3-205ENST00000463097 AURKAO14965 403 aa7.48□□□□□ -1.21
COPS3-205ENST00000463097 MEFVO15553 781 aaPredicted RBP7.48□□□□□ -1.21
COPS3-205ENST00000463097 ULK1O75385 1050 aa7.48□□□□□ -1.21
COPS3-205ENST00000463097 GSNP06396 782 aa7.48□□□□□ -1.21
COPS3-205ENST00000463097 CKMP06732 381 aa7.48□□□□□ -1.21
COPS3-205ENST00000463097 CT47B1P0C2W7 299 aaPredicted RBP7.48□□□□□ -1.21
COPS3-205ENST00000463097 U2AF1L5P0DN76 240 aaPredicted RBP7.48□□□□□ -1.21
COPS3-205ENST00000463097 MYBL2P10244 700 aa7.48□□□□□ -1.21
COPS3-205ENST00000463097 HOXB4P17483 251 aaPredicted RBP7.48□□□□□ -1.21
COPS3-205ENST00000463097 CCND1P24385 295 aa7.48□□□□□ -1.21
COPS3-205ENST00000463097 U2AF1Q01081 240 aaKnown RBP eCLIP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms