RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 SYNE3Q6ZMZ3 975 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CCDC82Q8N4S0 544 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 TBC1D5Q92609 795 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 MAML3Q96JK9 1138 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 AGXT2Q9BYV1 514 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 FAM217BQ9NTX9 383 aaPredicted RBP19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 FBXO40Q9UH90 709 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 DDX49Q9Y6V7 483 aaKnown RBP19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 SMCHD1A6NHR9 2005 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 GOLGA8AA7E2F4 631 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 GOLGA8BA8MQT2 603 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 IGHA2P01877 340 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CALM1P0DP23 149 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CALM2P0DP24 149 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CALM3P0DP25 149 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CCL5P13501 91 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CDC27P30260 824 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 KIF5BP33176 963 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 TMTC3Q6ZXV5 915 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 FBXO11Q86XK2 927 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 PDRG1Q9NUG6 133 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 ZNF236Q9UL36 1845 aa19.36■□□□□ 0.69
HLA-DPA1-245ENST00000463066 POTEFA5A3E0 1075 aa19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 ZBTB5O15062 677 aa19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 PRKAR2AP13861 404 aaKnown RBP19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 ANAPC15P60006 121 aa19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CACNB2Q08289 660 aaPredicted RBP19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 BAATQ14032 418 aaPredicted RBP19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 RTN1Q16799 776 aa19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 PRAMEF19Q5SWL8 479 aa19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 SLC30A10Q6XR72 485 aa19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 TRPV1Q8NER1 839 aa19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 SPZ1Q9BXG8 430 aa19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CYP39A1Q9NYL5 469 aa19.35■□□□□ 0.69
HLA-DPA1-245ENST00000463066 ASTN1O14525 1302 aa19.34■□□□□ 0.69
HLA-DPA1-245ENST00000463066 SOWAHBA6NEL2 793 aa19.34■□□□□ 0.69
HLA-DPA1-245ENST00000463066 POTEB2H3BUK9 544 aa19.34■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CCND3P30281 292 aaPredicted RBP19.34■□□□□ 0.69
HLA-DPA1-245ENST00000463066 UBXN2AP68543 259 aa19.34■□□□□ 0.69
HLA-DPA1-245ENST00000463066 MAP3K21Q5TCX8 1036 aa19.34■□□□□ 0.69
HLA-DPA1-245ENST00000463066 FAM133AQ8N9E0 248 aa19.34■□□□□ 0.69
HLA-DPA1-245ENST00000463066 IL17RAQ96F46 866 aa19.34■□□□□ 0.69
HLA-DPA1-245ENST00000463066 BAZ2BQ9UIF8 2168 aaKnown RBP19.33■□□□□ 0.69
HLA-DPA1-245ENST00000463066 OPLAHO14841 1288 aa19.33■□□□□ 0.68
HLA-DPA1-245ENST00000463066 ADD1P35611 737 aaKnown RBP19.33■□□□□ 0.68
HLA-DPA1-245ENST00000463066 GNAQP50148 359 aa19.33■□□□□ 0.68
HLA-DPA1-245ENST00000463066 FUT2Q10981 343 aa19.33■□□□□ 0.68
HLA-DPA1-245ENST00000463066 OLFML2BQ68BL8 750 aa19.33■□□□□ 0.68
HLA-DPA1-245ENST00000463066 FBXL16Q8N461 479 aa19.33■□□□□ 0.68
HLA-DPA1-245ENST00000463066 AMNQ9BXJ7 453 aa19.33■□□□□ 0.68
HLA-DPA1-245ENST00000463066 RNF208Q9H0X6 261 aa19.33■□□□□ 0.68
HLA-DPA1-245ENST00000463066 ABCB11O95342 1321 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 PNMA6FA0A0J9YX94 578 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 PTPDC1A2A3K4 754 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 EIF5BO60841 1220 aaKnown RBP19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 PPFIA3O75145 1194 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 CALML3P27482 149 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 PDIA3P30101 505 aaKnown RBP19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 METAP2P50579 478 aaKnown RBP eCLIP19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 CCT2P78371 535 aaKnown RBP19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 MFSD14CQ5VZR4 134 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 TRMT44Q8IYL2 757 aaKnown RBP19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 KIF2CQ99661 725 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 LZTS2Q9BRK4 669 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 NCOA5Q9HCD5 579 aaKnown RBP19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 SLC5A4Q9NY91 659 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 PCDHA1Q9Y5I3 950 aa19.32■□□□□ 0.68
HLA-DPA1-245ENST00000463066 CNTNAP5Q8WYK1 1306 aa19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 DTNBO60941 627 aa19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 EN2P19622 333 aaPredicted RBP19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 AK2P54819 239 aa19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 EVCP57679 992 aa19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 RNF207Q6ZRF8 634 aa19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 NOL8Q76FK4 1167 aaKnown RBP19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 RRP36Q96EU6 259 aaKnown RBP19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 TINF2Q9BSI4 451 aa19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 C22orf23Q9BZE7 217 aa19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 PNMA2Q9UL42 364 aa19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 DIS3Q9Y2L1 958 aaKnown RBP19.31■□□□□ 0.68
HLA-DPA1-245ENST00000463066 PFASO15067 1338 aa19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 SNAI1O95863 264 aaPredicted RBP19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 SMARCA1P28370 1054 aa19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 RPS6P62753 249 aaKnown RBP19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 STK3Q13188 491 aa19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 DEFB118Q96PH6 123 aa19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 TMEM106CQ9BVX2 250 aa19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 RBM28Q9NW13 759 aaKnown RBP19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 COL20A1Q9P218 1284 aa19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 MRPL11Q9Y3B7 192 aaKnown RBP19.3■□□□□ 0.68
HLA-DPA1-245ENST00000463066 RPTORQ8N122 1335 aa19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 CYBAP13498 195 aa19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 NEK4P51957 841 aa19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 RCAN1P53805 252 aa19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 SYTL5Q8TDW5 730 aaPredicted RBP19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 GPKOWQ92917 476 aaPredicted RBP eCLIP19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 SHISA4Q96DD7 197 aa19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 HMX1Q9NP08 348 aaPredicted RBP19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 PAK6Q9NQU5 681 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms