RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
COL6A1-202ENST00000463060 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 BTBD18B2RXH4 712 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 H3BQV1 296 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 CALML3P27482 149 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 NLRP5P59047 1200 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 SREBF2Q12772 1141 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 RESTQ13127 1097 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 TRIM29Q14134 588 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 USH1GQ495M9 461 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 TEX2Q8IWB9 1127 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 CPXCR1Q8N123 301 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 OXER1Q8TDS5 423 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 GTF3C2Q8WUA4 911 aaPredicted RBP16.5■□□□□ 0.23
COL6A1-202ENST00000463060 FOXP1Q9H334 677 aaPredicted RBP16.5■□□□□ 0.23
COL6A1-202ENST00000463060 RIC8AQ9NPQ8 531 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 MORF4L1Q9UBU8 362 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 CCPG1Q9ULG6 757 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 PCDHA4Q9UN74 947 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 MEIS2O14770 477 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 PEX10O60683 326 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 AOC2O75106 756 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 STAT3P40763 770 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 CLK2P49760 499 aaKnown RBP16.49■□□□□ 0.23
COL6A1-202ENST00000463060 Q3C1V9 767 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 RIOX2Q8IUF8 465 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 DIS3L2Q8IYB7 885 aaKnown RBP16.49■□□□□ 0.23
COL6A1-202ENST00000463060 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
COL6A1-202ENST00000463060 BLIDQ8IZY5 108 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 TEX13BQ9BXU2 312 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 MAF1Q9H063 256 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
COL6A1-202ENST00000463060 MRPL11Q9Y3B7 192 aaKnown RBP16.49■□□□□ 0.23
COL6A1-202ENST00000463060 PIK3CDO00329 1044 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 F13A1P00488 732 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 GNA11P29992 359 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
COL6A1-202ENST00000463060 HTRA3P83110 453 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 NR5A1Q13285 461 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 TKFCQ3LXA3 575 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 MUM1L1Q5H9M0 696 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL6A1-202ENST00000463060 TBC1D5Q92609 795 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 SPATC1LQ9H0A9 340 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 ZSCAN16Q9H4T2 348 aaPredicted RBP16.48■□□□□ 0.23
COL6A1-202ENST00000463060 PSTPIP2Q9H939 334 aa16.48■□□□□ 0.23
COL6A1-202ENST00000463060 ALAS1P13196 640 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 KRT2P35908 639 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 MAP2K2P36507 400 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 VEGFBP49765 207 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 ADCY7P51828 1080 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 MRPL12P52815 198 aaKnown RBP16.47■□□□□ 0.23
COL6A1-202ENST00000463060 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL6A1-202ENST00000463060 NOM1Q5C9Z4 860 aaKnown RBP16.47■□□□□ 0.23
COL6A1-202ENST00000463060 EARS2Q5JPH6 523 aaKnown RBP16.47■□□□□ 0.23
COL6A1-202ENST00000463060 SNRNP48Q6IEG0 339 aaKnown RBP16.47■□□□□ 0.23
COL6A1-202ENST00000463060 FERMT3Q86UX7 667 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 SAMD3Q8N6K7 520 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 TRERF1Q96PN7 1200 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 PARK7Q99497 189 aaKnown RBP16.47■□□□□ 0.23
COL6A1-202ENST00000463060 MOV10L1Q9BXT6 1211 aaKnown RBP16.47■□□□□ 0.23
COL6A1-202ENST00000463060 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 PCDHA6Q9UN73 950 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
COL6A1-202ENST00000463060 PCDHA8Q9Y5H6 950 aa16.47■□□□□ 0.23
COL6A1-202ENST00000463060 NFIBO00712 420 aa16.46■□□□□ 0.23
COL6A1-202ENST00000463060 BCRP11274 1271 aa16.46■□□□□ 0.23
COL6A1-202ENST00000463060 HSD17B4P51659 736 aa16.46■□□□□ 0.23
COL6A1-202ENST00000463060 ERVK-9P63128 1117 aa16.46■□□□□ 0.23
COL6A1-202ENST00000463060 ERVK-24P63145 666 aa16.46■□□□□ 0.23
COL6A1-202ENST00000463060 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.23
COL6A1-202ENST00000463060 NOSTRINQ8IVI9 506 aa16.46■□□□□ 0.23
COL6A1-202ENST00000463060 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
COL6A1-202ENST00000463060 CUL5Q93034 780 aa16.46■□□□□ 0.23
COL6A1-202ENST00000463060 R3HDMLQ9H3Y0 253 aa16.46■□□□□ 0.23
COL6A1-202ENST00000463060 MAP3K20Q9NYL2 800 aaKnown RBP16.46■□□□□ 0.23
COL6A1-202ENST00000463060 CA12O43570 354 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 EDIL3O43854 480 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 GRM1Q13255 1194 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 FOXD4L5Q5VV16 416 aaPredicted RBP16.45■□□□□ 0.22
COL6A1-202ENST00000463060 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 USP17L6PQ6QN14 398 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 C17orf99Q6UX52 265 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 CLEC17AQ6ZS10 378 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 BRAPQ7Z569 592 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 DNAJC5GQ8N7S2 189 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 SHCBP1Q8NEM2 672 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 CHST13Q8NET6 341 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 GPRC5AQ8NFJ5 357 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 RASGRP4Q8TDF6 673 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 FOXD4L4Q8WXT5 416 aaPredicted RBP16.45■□□□□ 0.22
COL6A1-202ENST00000463060 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 RNF146Q9NTX7 359 aa16.45■□□□□ 0.22
COL6A1-202ENST00000463060 FAM205CA6NFA0 338 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 TLR2O60603 784 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 SLC25A27O95847 323 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 PLS1Q14651 629 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 TAF1CQ15572 869 aaPredicted RBP16.44■□□□□ 0.22
COL6A1-202ENST00000463060 UBE2SQ16763 222 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms