RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	MICU3	Q86XE3	530 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	FBXO11	Q86XK2	927 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	U2AF1L4	Q8WU68	220 aa	Known RBP	11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	JMJD4	Q9H9V9	463 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	A1CF	Q9NQ94	594 aa	Known RBP	11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	PFAS	O15067	1338 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	FRMPD3	Q5JV73	1810 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	PDE4DIP	Q5VU43	2346 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	PALM3	A6NDB9	673 aa	Predicted RBP	11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	NFIB	O00712	420 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	SLC34A2	O95436	690 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	CALM1	P0DP23	149 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	CALM2	P0DP24	149 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	CALM3	P0DP25	149 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	CALML3	P27482	149 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	PSMA5	P28066	241 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	TSGA10IP	Q3SY00	556 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	ANO1	Q5XXA6	986 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	OLFML2B	Q68BL8	750 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970		Q6ZUG5	572 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	CCDC82	Q8N4S0	544 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	PIGS	Q96S52	555 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	MTA3	Q9BTC8	594 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	USP26	Q9BXU7	913 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	PNMA2	Q9UL42	364 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	CNPY2	Q9Y2B0	182 aa		11.17	□□□□□ -0.62
PSMD4-208	ENST00000462970	ABCB11	O95342	1321 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	WDR19	Q8NEZ3	1342 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	LCT	P09848	1927 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	KLF18	A0A0U1RQI7	1052 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	PLEKHA8P1	O95397	391 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	SGPL1	O95470	568 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	LIFR	P42702	1097 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	GJA8	P48165	433 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	EXOSC10	Q01780	885 aa	Known RBP	11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	TROAP	Q12815	778 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	BAAT	Q14032	418 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	SLC30A10	Q6XR72	485 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	RNF207	Q6ZRF8	634 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	CMTR1	Q8N1G2	835 aa	Known RBP	11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	TRPV1	Q8NER1	839 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	BRF1	Q92994	677 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	TINF2	Q9BSI4	451 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	AMN	Q9BXJ7	453 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	CYP39A1	Q9NYL5	469 aa		11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	TNRC18	O15417	2968 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD4-208	ENST00000462970	DNAJC25-GNG10	A0A024R161	153 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	GOLGA8A	A7E2F4	631 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	GOLGA8B	A8MQT2	603 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	ZBTB5	O15062	677 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	ZBTB43	O43298	467 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	FARP2	O94887	1054 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	CYBA	P13498	195 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	RPS6KB1	P23443	525 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	GNAQ	P50148	359 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	APOBR	Q0VD83	1088 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	MAP3K21	Q5TCX8	1036 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	PRPF38B	Q5VTL8	546 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	APOA5	Q6Q788	366 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	CLEC4D	Q8WXI8	215 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	KCNB2	Q92953	911 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	SHISA4	Q96DD7	197 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	RRP36	Q96EU6	259 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	PURB	Q96QR8	312 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	UPF3B	Q9BZI7	483 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	PAK6	Q9NQU5	681 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	SEC63	Q9UGP8	760 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	BRPF3	Q9ULD4	1205 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	DIS3	Q9Y2L1	958 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	PCDHA1	Q9Y5I3	950 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	CYP46A1	Q9Y6A2	500 aa		11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	DDX49	Q9Y6V7	483 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-208	ENST00000462970	hCG_1642624	A0A1W2PR95	340 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	SOWAHB	A6NEL2	793 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	EIF5B	O60841	1220 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	CFB	P00751	764 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	RTN1	Q16799	776 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	SLC35G1	Q2M3R5	365 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	NOL8	Q76FK4	1167 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	ARMCX2	Q7L311	632 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	FAM133A	Q8N9E0	248 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	FANCB	Q8NB91	859 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	LZTS2	Q9BRK4	669 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	DDX20	Q9UHI6	824 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	MRPL11	Q9Y3B7	192 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	GTF3C3	Q9Y5Q9	886 aa		11.14	□□□□□ -0.63
PSMD4-208	ENST00000462970	PNMA6F	A0A0J9YX94	578 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	ASB14	A6NK59	587 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	EPB41L2	O43491	1005 aa	Known RBP	11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	CYTH3	O43739	400 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	PPP1R11	O60927	126 aa	Predicted RBP	11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	SEC24B	O95487	1268 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	RPS6	P62753	249 aa	Known RBP	11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	C1QBP	Q07021	282 aa	Known RBP	11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	RUFY3	Q7L099	469 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	EEPD1	Q7L9B9	569 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	SGMS1	Q86VZ5	419 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms