RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 DIS3L2Q8IYB7 885 aaKnown RBP12.25□□□□□ -0.45
RTF1-202ENST00000462276 BLIDQ8IZY5 108 aa12.25□□□□□ -0.45
RTF1-202ENST00000462276 CHST13Q8NET6 341 aa12.25□□□□□ -0.45
RTF1-202ENST00000462276 SMCR8Q8TEV9 937 aaPredicted RBP12.25□□□□□ -0.45
RTF1-202ENST00000462276 GPKOWQ92917 476 aaPredicted RBP eCLIP12.25□□□□□ -0.45
RTF1-202ENST00000462276 ZNF214Q9UL59 606 aaPredicted RBP12.25□□□□□ -0.45
RTF1-202ENST00000462276 ZNF536O15090 1300 aa12.25□□□□□ -0.45
RTF1-202ENST00000462276 F13A1P00488 732 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 TRAPPC10P48553 1259 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 HTRA3P83110 453 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 KIF23Q02241 960 aaPredicted RBP12.24□□□□□ -0.45
RTF1-202ENST00000462276 AP3B2Q13367 1082 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 TMEM132BQ14DG7 1078 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 MCTP1Q6DN14 999 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 CCDC174Q6PII3 467 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
RTF1-202ENST00000462276 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
RTF1-202ENST00000462276 RIOX2Q8IUF8 465 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 CPXCR1Q8N123 301 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 REXO1Q8N1G1 1221 aaKnown RBP12.24□□□□□ -0.45
RTF1-202ENST00000462276 JMYQ8N9B5 988 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 SHCBP1Q8NEM2 672 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 GPRC5AQ8NFJ5 357 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 COA7Q96BR5 231 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 CAPNS2Q96L46 248 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 PTPN18Q99952 460 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 MROH8Q9H579 483 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 RAVER2Q9HCJ3 691 aaKnown RBP12.24□□□□□ -0.45
RTF1-202ENST00000462276 MORF4L1Q9UBU8 362 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 KCNJ14Q9UNX9 436 aa12.24□□□□□ -0.45
RTF1-202ENST00000462276 GCOM1H8Y6P7 765 aaPredicted RBP12.23□□□□□ -0.45
RTF1-202ENST00000462276 POLR2MP0CAP2 368 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 GUCY1B3Q02153 619 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 NPY5RQ15761 445 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 USH1GQ495M9 461 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 SNRNP48Q6IEG0 339 aaKnown RBP12.23□□□□□ -0.45
RTF1-202ENST00000462276 TYW1BQ6NUM6 668 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 CLEC17AQ6ZS10 378 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
RTF1-202ENST00000462276 KRT25Q7Z3Z0 450 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 NOSTRINQ8IVI9 506 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 AGBL1Q96MI9 1066 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 SPATC1LQ9H0A9 340 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 RBPJLQ9UBG7 517 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 ZDHHC9Q9Y397 364 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 MYH4Q9Y623 1939 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 TRPM7Q96QT4 1865 aa12.23□□□□□ -0.45
RTF1-202ENST00000462276 CCDC194A0A1B0GVG4 234 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 BTBD18B2RXH4 712 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 M0R2N6 131 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 DTNBO60941 627 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 ALAS1P13196 640 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 SNAP25P60880 206 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 RESTQ13127 1097 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 PKP1Q13835 747 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 FAM110CQ1W6H9 321 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 RILPL1Q5EBL4 403 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 CYP4F22Q6NT55 531 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 CLEC4DQ8WXI8 215 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 ZNF396Q96N95 335 aaPredicted RBP12.22□□□□□ -0.45
RTF1-202ENST00000462276 TRERF1Q96PN7 1200 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 NAP1L4Q99733 375 aaKnown RBP12.22□□□□□ -0.45
RTF1-202ENST00000462276 ACAD9Q9H845 621 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 EHMT1Q9H9B1 1298 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 GJB4Q9NTQ9 266 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 CFAP45Q9UL16 551 aa12.22□□□□□ -0.45
RTF1-202ENST00000462276 NOL7Q9UMY1 257 aaKnown RBP12.22□□□□□ -0.45
RTF1-202ENST00000462276 ATAD5Q96QE3 1844 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 SPDYE3A6NKU9 549 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 IGF2BP3O00425 579 aaKnown RBP eCLIP12.21□□□□□ -0.45
RTF1-202ENST00000462276 CA12O43570 354 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 STRNO43815 780 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 TLR2O60603 784 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 BMP15O95972 392 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 CYP2C8P10632 490 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 CLK2P49760 499 aaKnown RBP12.21□□□□□ -0.45
RTF1-202ENST00000462276 HSD17B4P51659 736 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 ERVK-24P63145 666 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 ORC2Q13416 577 aaPredicted RBP12.21□□□□□ -0.45
RTF1-202ENST00000462276 PLS1Q14651 629 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.45
RTF1-202ENST00000462276 ABRAQ8N0Z2 381 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 TNFRSF25Q93038 417 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 SHISA4Q96DD7 197 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 RNF146Q9NTX7 359 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 BTBD7Q9P203 1132 aa12.21□□□□□ -0.45
RTF1-202ENST00000462276 OTOFQ9HC10 1997 aa12.21□□□□□ -0.46
RTF1-202ENST00000462276 PFASO15067 1338 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 MEIS2O14770 477 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 FOSBP53539 338 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 NONOQ15233 471 aaKnown RBP eCLIP12.2□□□□□ -0.46
RTF1-202ENST00000462276 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 FERMT3Q86UX7 667 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 CCAR1Q8IX12 1150 aaKnown RBP12.2□□□□□ -0.46
RTF1-202ENST00000462276 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 PAGR1Q9BTK6 254 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms