RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CLTBP09497 229 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 FGRP09769 529 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 RAG1P15918 1043 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 TAL1P17542 331 aaPredicted RBP10.38□□□□□ -0.75
LDB1-203ENST00000461873 CALML3P27482 149 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 ACLYP53396 1101 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 TNFAIP2Q03169 654 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 IFIT1BQ5T764 474 aaKnown RBP10.38□□□□□ -0.75
LDB1-203ENST00000461873 RNF207Q6ZRF8 634 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 KIAA1211Q6ZU35 1233 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 RALYLQ86SE5 291 aaKnown RBP10.38□□□□□ -0.75
LDB1-203ENST00000461873 A1CFQ9NQ94 594 aaKnown RBP10.38□□□□□ -0.75
LDB1-203ENST00000461873 GPHNQ9NQX3 736 aaPredicted RBP10.38□□□□□ -0.75
LDB1-203ENST00000461873 TMEM39AQ9NV64 488 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 PHF24Q9UPV7 400 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 RAD50Q92878 1312 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 SYNRGQ9UMZ2 1314 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 A0A1W2PQ45 241 aaPredicted RBP10.37□□□□□ -0.75
LDB1-203ENST00000461873 A0A1W2PQY0 241 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 B4E1Z4 1266 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 SNAI1O95863 264 aaPredicted RBP10.37□□□□□ -0.75
LDB1-203ENST00000461873 PARP1P09874 1014 aaKnown RBP10.37□□□□□ -0.75
LDB1-203ENST00000461873 PDHBP11177 359 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 PDE4DQ08499 809 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 TRAF1Q13077 416 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 KCNA10Q16322 511 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 TTC22Q5TAA0 569 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 C1orf53Q5VUE5 145 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 IQSEC1Q6DN90 963 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.37□□□□□ -0.75
LDB1-203ENST00000461873 EEPD1Q7L9B9 569 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 PNMA1Q8ND90 353 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 ZSCAN10Q96SZ4 725 aaPredicted RBP10.37□□□□□ -0.75
LDB1-203ENST00000461873 RANBP17Q9H2T7 1088 aaKnown RBP10.37□□□□□ -0.75
LDB1-203ENST00000461873 CYP39A1Q9NYL5 469 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 TRIOBPQ9H2D6 2365 aa10.37□□□□□ -0.75
LDB1-203ENST00000461873 A0A0U1RQG5 324 aaPredicted RBP10.36□□□□□ -0.75
LDB1-203ENST00000461873 FOXP2O15409 715 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 CABYRO75952 493 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 IGHA2P01877 340 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 ASGR1P07306 291 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 TLE2Q04725 743 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 ZNF543Q08ER8 600 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 LRIT3Q3SXY7 679 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 USH1GQ495M9 461 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 ASPRV1Q53RT3 343 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 BTNL9Q6UXG8 535 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 TBC1D10CQ8IV04 446 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 FAM133AQ8N9E0 248 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 PRO3102Q9H379 93 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 VAT1LQ9HCJ6 419 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 VTA1Q9NP79 307 aa10.36□□□□□ -0.75
LDB1-203ENST00000461873 MCM3APO60318 1980 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 ZNF536O15090 1300 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 ELP1O95163 1332 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 TNKSO95271 1327 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 NEDD4P46934 1319 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 LOC102724159A0A0B4J2E5 919 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 DYNC1LI2O43237 492 aaPredicted RBP10.35□□□□□ -0.75
LDB1-203ENST00000461873 ADAMTS4O75173 837 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 GOLGA8HP0CJ92 632 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 NOVP48745 357 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 GJA9P57773 515 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 BAATQ14032 418 aaPredicted RBP10.35□□□□□ -0.75
LDB1-203ENST00000461873 PWP2Q15269 919 aaKnown RBP10.35□□□□□ -0.75
LDB1-203ENST00000461873 MUM1L1Q5H9M0 696 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 GPR153Q6NV75 609 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 CASC1Q6TDU7 716 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 TLK2Q86UE8 772 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 BADQ92934 168 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 LENG1Q96BZ8 264 aaPredicted RBP10.35□□□□□ -0.75
LDB1-203ENST00000461873 TOX2Q96NM4 488 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 SEZ6LQ9BYH1 1024 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 ZSWIM5Q9P217 1185 aa10.35□□□□□ -0.75
LDB1-203ENST00000461873 ABCB11O95342 1321 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 WDR19Q8NEZ3 1342 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 DNAH12Q6ZR08 3092 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 IFIT3O14879 490 aaKnown RBP10.34□□□□□ -0.75
LDB1-203ENST00000461873 CST5P28325 142 aaPredicted RBP10.34□□□□□ -0.75
LDB1-203ENST00000461873 CPT1AP50416 773 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 ALDH5A1P51649 535 aaPredicted RBP10.34□□□□□ -0.75
LDB1-203ENST00000461873 FPGSQ05932 587 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 SNX17Q15036 470 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 CDC37Q16543 378 aaPredicted RBP10.34□□□□□ -0.75
LDB1-203ENST00000461873 FSCN1Q16658 493 aaKnown RBP10.34□□□□□ -0.75
LDB1-203ENST00000461873 FBXO16Q8IX29 292 aaPredicted RBP10.34□□□□□ -0.75
LDB1-203ENST00000461873 TMEM199Q8N511 208 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 DEFB123Q8N688 67 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 DNERQ8NFT8 737 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 NCOA7Q8NI08 942 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 LRCH3Q96II8 777 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 UBA5Q9GZZ9 404 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 PDLIM7Q9NR12 457 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 MRPL11Q9Y3B7 192 aaKnown RBP10.34□□□□□ -0.75
LDB1-203ENST00000461873 Q9Y3F1 56 aa10.34□□□□□ -0.75
LDB1-203ENST00000461873 MYH6P13533 1939 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 SOWAHBA6NEL2 793 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms