RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SNHG28P0DPA3 235 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 HAND2P61296 217 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 IKQ13123 557 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-207ENST00000461798 RRP12Q5JTH9 1297 aaKnown RBP10.79□□□□□ -0.68
BRCA1-207ENST00000461798 CWC27Q6UX04 472 aaKnown RBP10.79□□□□□ -0.68
BRCA1-207ENST00000461798 DGKHQ86XP1 1220 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 TBC1D10CQ8IV04 446 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 TDHQ8IZJ6 230 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 ANKS1AQ92625 1134 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 ESR2Q92731 530 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 DSCC1Q9BVC3 393 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 UBE2OQ9C0C9 1292 aaKnown RBP10.79□□□□□ -0.68
BRCA1-207ENST00000461798 TOMM22Q9NS69 142 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 DIAPH3Q9NSV4 1193 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 PNMA2Q9UL42 364 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 MYH4Q9Y623 1939 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 SOWAHBA6NEL2 793 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 ASB14A6NK59 587 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 PDHBP11177 359 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 ALAS1P13196 640 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 PDE4AP27815 886 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 CST5P28325 142 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-207ENST00000461798 GJA9P57773 515 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 CNTN2Q02246 1040 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 CCDC178Q5BJE1 867 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 SYDE2Q5VT97 1194 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 TTBK2Q6IQ55 1244 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 ARMCX2Q7L311 632 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 RASGRP2Q7LDG7 609 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 CCDC144CPQ8IYA2 1237 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 MORC4Q8TE76 937 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 FERMT2Q96AC1 680 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 TOX2Q96NM4 488 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 HS3ST6Q96QI5 342 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 UPF3AQ9H1J1 476 aaKnown RBP10.78□□□□□ -0.68
BRCA1-207ENST00000461798 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 HOMER2Q9NSB8 354 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 PRKAG2Q9UGJ0 569 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 CTNNA3Q9UI47 895 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 ISY1Q9ULR0 285 aaKnown RBP10.78□□□□□ -0.68
BRCA1-207ENST00000461798 ATP11BQ9Y2G3 1177 aa10.78□□□□□ -0.68
BRCA1-207ENST00000461798 SMCHD1A6NHR9 2005 aa10.77□□□□□ -0.68
BRCA1-207ENST00000461798 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.68
BRCA1-207ENST00000461798 LOC102724159A0A0B4J2E5 919 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 MOXD2PA6NHM9 499 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 ACLYP53396 1101 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 SNAP25P60880 206 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-207ENST00000461798 TLE2Q04725 743 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 ZNF543Q08ER8 600 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 PWP2Q15269 919 aaKnown RBP10.77□□□□□ -0.69
BRCA1-207ENST00000461798 CCDC96Q2M329 555 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 CCDC144BQ3MJ40 725 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 TRIM60Q495X7 471 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 CCDC174Q6PII3 467 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 CHMP4CQ96CF2 233 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 LBHD1Q9BQE6 289 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-207ENST00000461798 CYP39A1Q9NYL5 469 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 ZHX1Q9UKY1 873 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-207ENST00000461798 CCPG1Q9ULG6 757 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 ELP1O95163 1332 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 SYNRGQ9UMZ2 1314 aa10.77□□□□□ -0.69
BRCA1-207ENST00000461798 A0A1W2PQ45 241 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-207ENST00000461798 A0A1W2PQY0 241 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 CTAGE5O15320 804 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 ADCY6O43306 1168 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 SLC16A2P36021 539 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 KCNA10Q16322 511 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 MUM1L1Q5H9M0 696 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 GPATCH4Q5T3I0 446 aaKnown RBP10.76□□□□□ -0.69
BRCA1-207ENST00000461798 TTC22Q5TAA0 569 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 IQSEC1Q6DN90 963 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 ANKRD33Q7Z3H0 272 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 PCSK9Q8NBP7 692 aaKnown RBP10.76□□□□□ -0.69
BRCA1-207ENST00000461798 NUP133Q8WUM0 1156 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 LENG1Q96BZ8 264 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-207ENST00000461798 LRCH3Q96II8 777 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 MAF1Q9H063 256 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 SPC25Q9HBM1 224 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 GPCPD1Q9NPB8 672 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 PDLIM7Q9NR12 457 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 ASTN1O14525 1302 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 NEDD4P46934 1319 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 WDR19Q8NEZ3 1342 aa10.76□□□□□ -0.69
BRCA1-207ENST00000461798 PLXNA1Q9UIW2 1896 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 TRIM43BA6NCK2 446 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 KIAA0355O15063 1070 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 KDM4AO75164 1064 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 GSPT1P15170 499 aaKnown RBP10.75□□□□□ -0.69
BRCA1-207ENST00000461798 CDK7P50613 346 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 TNFAIP2Q03169 654 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 IMMTQ16891 758 aaKnown RBP10.75□□□□□ -0.69
BRCA1-207ENST00000461798 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 RGS22Q8NE09 1264 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 CLEC4DQ8WXI8 215 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 TRIM43Q96BQ3 446 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-207ENST00000461798 ZSCAN10Q96SZ4 725 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-207ENST00000461798 KRT23Q9C075 422 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 STARD7Q9NQZ5 370 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 ZSWIM5Q9P217 1185 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms