RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 COPB2P35606 906 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 MCM2P49736 904 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 KIF22Q14807 665 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 MORN1Q5T089 497 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 PLEKHH3Q7Z736 793 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 CHST13Q8NET6 341 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 COA7Q96BR5 231 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 RNF26Q9BY78 433 aaPredicted RBP13.05□□□□□ -0.32
SSBP1-202ENST00000461433 SH2B1Q9NRF2 756 aaPredicted RBP13.05□□□□□ -0.32
SSBP1-202ENST00000461433 RNF146Q9NTX7 359 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 PNMA2Q9UL42 364 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 PCDHA1Q9Y5I3 950 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 ZNF236Q9UL36 1845 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 LCTP09848 1927 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 NFIBO00712 420 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 TNPO2O14787 897 aaKnown RBP13.04□□□□□ -0.32
SSBP1-202ENST00000461433 CPLX1O14810 134 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 STRNO43815 780 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 FDPSP14324 419 aaKnown RBP13.04□□□□□ -0.32
SSBP1-202ENST00000461433 GRB14Q14449 540 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 CCDC83Q8IWF9 413 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 NSUN7Q8NE18 718 aaKnown RBP13.04□□□□□ -0.32
SSBP1-202ENST00000461433 USP6NLQ92738 828 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 SLC26A6Q9BXS9 759 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 SEC63Q9UGP8 760 aaKnown RBP13.04□□□□□ -0.32
SSBP1-202ENST00000461433 GABRQQ9UN88 632 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 ABCB11O95342 1321 aa13.04□□□□□ -0.32
SSBP1-202ENST00000461433 RBBP6Q7Z6E9 1792 aaKnown RBP13.04□□□□□ -0.32
SSBP1-202ENST00000461433 GNRH1P01148 92 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 PFKFB3Q16875 520 aaPredicted RBP13.03□□□□□ -0.32
SSBP1-202ENST00000461433 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 WWC2Q6AWC2 1192 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 TYW1BQ6NUM6 668 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 OTOP1Q7RTM1 612 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 CCAR1Q8IX12 1150 aaKnown RBP13.03□□□□□ -0.32
SSBP1-202ENST00000461433 ABRAQ8N0Z2 381 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 GPKOWQ92917 476 aaPredicted RBP eCLIP13.03□□□□□ -0.32
SSBP1-202ENST00000461433 SNX21Q969T3 373 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 SHISA4Q96DD7 197 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 ACAD9Q9H845 621 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 PRDM10Q9NQV6 1147 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 FBXO40Q9UH90 709 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 PLXNA1Q9UIW2 1896 aa13.03□□□□□ -0.32
SSBP1-202ENST00000461433 DNAJC25-GNG10A0A024R161 153 aa13.02□□□□□ -0.32
SSBP1-202ENST00000461433 SLC15A5A6NIM6 579 aa13.02□□□□□ -0.32
SSBP1-202ENST00000461433 JAK2O60674 1132 aa13.02□□□□□ -0.32
SSBP1-202ENST00000461433 COBLO75128 1261 aa13.02□□□□□ -0.32
SSBP1-202ENST00000461433 FCER1AP12319 257 aa13.02□□□□□ -0.32
SSBP1-202ENST00000461433 SCG2P13521 617 aa13.02□□□□□ -0.32
SSBP1-202ENST00000461433 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.32
SSBP1-202ENST00000461433 CPLX2Q6PUV4 134 aaKnown RBP13.02□□□□□ -0.32
SSBP1-202ENST00000461433 SMARCC2Q8TAQ2 1214 aa13.02□□□□□ -0.32
SSBP1-202ENST00000461433 MMP19Q99542 508 aa13.02□□□□□ -0.32
SSBP1-202ENST00000461433 A1CFQ9NQ94 594 aaKnown RBP13.02□□□□□ -0.32
SSBP1-202ENST00000461433 SRRDQ9UH36 339 aa13.02□□□□□ -0.32
SSBP1-202ENST00000461433 MRPL11Q9Y3B7 192 aaKnown RBP13.02□□□□□ -0.32
SSBP1-202ENST00000461433 STXBP3O00186 592 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 CDKL5O76039 1030 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 ADORA2AP29274 412 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 FLT3LGP49771 235 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 GHRHRQ02643 423 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 PRKCZQ05513 592 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 RGS22Q8NE09 1264 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 AIFM3Q96NN9 605 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 BARHL2Q9NY43 387 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.33
SSBP1-202ENST00000461433 TRIM17Q9Y577 477 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 IVNS1ABPQ9Y6Y0 642 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 STK36Q9NRP7 1315 aa13.02□□□□□ -0.33
SSBP1-202ENST00000461433 PTPDC1A2A3K4 754 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 DEXIO95424 95 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 PGK2P07205 417 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 TRAF1Q13077 416 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 MAP2K5Q13163 448 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 CUL4AQ13619 759 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 KCTD2Q14681 263 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 HEATR3Q7Z4Q2 680 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 TRIM22Q8IYM9 498 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 ANKRD35Q8N283 1001 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 NPLOC4Q8TAT6 608 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 LLPHQ9BRT6 129 aaKnown RBP13.01□□□□□ -0.33
SSBP1-202ENST00000461433 CYP39A1Q9NYL5 469 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 HTTP42858 3142 aa13.01□□□□□ -0.33
SSBP1-202ENST00000461433 hCG_1984214I3L0E3 225 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 HOXC6P09630 235 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 HOXD10P28358 340 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 RPS6P62753 249 aaKnown RBP13□□□□□ -0.33
SSBP1-202ENST00000461433 AKAP17AQ02040 695 aaKnown RBP13□□□□□ -0.33
SSBP1-202ENST00000461433 BAATQ14032 418 aaPredicted RBP13□□□□□ -0.33
SSBP1-202ENST00000461433 ARHGEF6Q15052 776 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 ZNF792Q3KQV3 632 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 NSMFQ6X4W1 530 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 SLC30A10Q6XR72 485 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 RNF207Q6ZRF8 634 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 CTU1Q7Z7A3 348 aaKnown RBP13□□□□□ -0.33
SSBP1-202ENST00000461433 ZNF713Q8N859 430 aaPredicted RBP13□□□□□ -0.33
SSBP1-202ENST00000461433 SOCS4Q8WXH5 440 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 DDX11Q96FC9 970 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms