RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PARD3BQ8TEW8 1205 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SLC13A4Q9UKG4 626 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SOS2Q07890 1332 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-205ENST00000461221 GTPBP6O43824 516 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-205ENST00000461221 PYGLP06737 847 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 TMOD1P28289 359 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 PTK2Q05397 1052 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SNX1Q13596 522 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 TFDP1Q14186 410 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 FAM160B1Q5W0V3 765 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 ATG16L1Q676U5 607 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 ARMCX5Q6P1M9 558 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 FBXL13Q8NEE6 735 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 CCHCR1Q8TD31 782 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SMCR8Q8TEV9 937 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-205ENST00000461221 ATP6V0A1Q93050 837 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 RPS6KC1Q96S38 1066 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SERPINI1Q99574 410 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 DBNDD2Q9BQY9 259 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SPDYE2BA6NHP3 402 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 MAP3K7O43318 606 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 ATP8B1O43520 1251 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 CPP00450 1065 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 SPDYE6P0CI01 402 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 POLR2FP61218 127 aaKnown RBP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 TIMM10P62072 90 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 PABPC4Q13310 644 aaKnown RBP eCLIP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 KRT80Q6KB66 452 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 LCA5Q86VQ0 697 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 FAM178BQ8IXR5 827 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 SCYL3Q8IZE3 742 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 NRBP2Q9NSY0 501 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 POC1B-GALNT4F8VUJ3 575 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 POLR2MP0CAP2 368 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 DEUP1Q05D60 604 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 HP1BP3Q5SSJ5 553 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 CDC37L1Q7L3B6 337 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 NOP9Q86U38 636 aaKnown RBP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 BLIDQ8IZY5 108 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 FNBP4Q8N3X1 1017 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 POLR3CQ9BUI4 534 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 BCL2L12Q9HB09 334 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 VPS54Q9P1Q0 977 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 KIAA1468Q9P260 1216 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 ZNF233A6NK53 670 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 H0YIN7 160 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 TFAP4Q01664 338 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 TNFAIP1Q13829 316 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 KIF22Q14807 665 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 KAZNQ674X7 775 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 EFCAB13Q8IY85 973 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 STK17AQ9UEE5 414 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 NUP160Q12769 1436 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 YTHDC2Q9H6S0 1430 aaKnown RBP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 TESPA1A2RU30 521 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 SGK1O00141 431 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 PFKFB1P16118 471 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 NOP14P78316 857 aaKnown RBP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 FAM47CQ5HY64 1035 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 TTBK2Q6IQ55 1244 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 C17orf53Q8N3J3 647 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-205ENST00000461221 RNF169Q8NCN4 708 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 PGBD1Q96JS3 809 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 JRKLQ9Y4A0 524 aa9.79□□□□□ -0.84
BRCA1-205ENST00000461221 OR52Z1P0C646 297 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 SKIP12755 728 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 MSH2P43246 934 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 MYL7Q01449 175 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 PPM1KQ8N3J5 372 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 DCLK2Q8N568 766 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 FAM89AQ96GI7 184 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 MYL10Q9BUA6 226 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 PYGBP11216 843 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 IFNA8P32881 189 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 THOC5Q13769 683 aaKnown RBP9.78□□□□□ -0.84
BRCA1-205ENST00000461221 DLGAP5Q15398 846 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 TM6SF1Q9BZW5 370 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 CNOT10Q9H9A5 744 aaKnown RBP9.78□□□□□ -0.84
BRCA1-205ENST00000461221 SLC12A6Q9UHW9 1150 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 TLK1Q9UKI8 766 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 CSADQ9Y600 493 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 IQGAP2Q13576 1575 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 EEF1B2P24534 225 aaKnown RBP9.78□□□□□ -0.84
BRCA1-205ENST00000461221 ARHGDIAP52565 204 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 PPARAQ07869 468 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 MYLK4Q86YV6 388 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-205ENST00000461221 MAPKAPK5Q8IW41 473 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 NIM1KQ8IY84 436 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 LRRC59Q96AG4 307 aaKnown RBP9.78□□□□□ -0.84
BRCA1-205ENST00000461221 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.78□□□□□ -0.84
BRCA1-205ENST00000461221 ZNF532Q9HCE3 1301 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 MYO1FO00160 1098 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 EPHB4P54760 987 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 GUCY2DQ02846 1103 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 IFRD2Q12894 506 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-205ENST00000461221 FAM186BQ8IYM0 893 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 TGFBRAP1Q8WUH2 860 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms