RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 PPP1R13BQ96KQ4 1090 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 BPIFA3Q9BQP9 254 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 IRF2BPLQ9H1B7 796 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 LY9Q9HBG7 655 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 MKNK2Q9HBH9 465 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 ZNRF3Q9ULT6 936 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 TIAM2Q8IVF5 1701 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 MAST2Q6P0Q8 1798 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 EIF3CLB5ME19 914 aaKnown RBP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 ZSCAN9O15535 394 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 CDC27P30260 824 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 TRPC1P48995 793 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 EVCP57679 992 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 SHROOM1Q2M3G4 852 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 E4F1Q66K89 784 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 MAMSTRQ6ZN01 415 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 TMC6Q7Z403 805 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 CLEC10AQ8IUN9 316 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 ZSCAN29Q8IWY8 852 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 NUP133Q8WUM0 1156 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 FAM163AQ96GL9 167 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 EIF3CQ99613 913 aaKnown RBP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 ANGEL1Q9UNK9 670 aaKnown RBP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 KIF13BQ9NQT8 1826 aa9.52□□□□□ -0.88
HDAC9-219ENST00000461159 KIAA1551Q9HCM1 1747 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 A0A1W2PQ27 194 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 A0A1W2PQ64 194 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 A0A1W2PQD8 194 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 TSPY2A6NKD2 308 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 TCP10L2B9ZVM9 353 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 PPFIA4O75335 1185 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 FDPSP14324 419 aaKnown RBP9.52□□□□□ -0.89
HDAC9-219ENST00000461159 GUCY1B3Q02153 619 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 ERCC6LQ2NKX8 1250 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 RSBN1LQ6PCB5 846 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-219ENST00000461159 KCNV1Q6PIU1 500 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 RASGRP2Q7LDG7 609 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 HOMER1Q86YM7 354 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 SLF2Q8IX21 1173 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 MICAL1Q8TDZ2 1067 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 SRRTQ9BXP5 876 aaKnown RBP9.52□□□□□ -0.89
HDAC9-219ENST00000461159 ARPP21Q9UBL0 812 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-219ENST00000461159 DLEC1Q9Y238 1755 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 TNKSO95271 1327 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 MYH15Q9Y2K3 1946 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 EIF6P56537 245 aaKnown RBP9.52□□□□□ -0.89
HDAC9-219ENST00000461159 TFAP4Q01664 338 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 ADALQ6DHV7 355 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 OTUD7BQ6GQQ9 843 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 GBP6Q6ZN66 633 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 ESR2Q92731 530 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 PHKBQ93100 1093 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 ZNF274Q96GC6 653 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-219ENST00000461159 UBAC1Q9BSL1 405 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 KRT23Q9C075 422 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 FTOQ9C0B1 505 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC9-219ENST00000461159 XPO4Q9C0E2 1151 aaKnown RBP9.52□□□□□ -0.89
HDAC9-219ENST00000461159 FAM217BQ9NTX9 383 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-219ENST00000461159 TMOD4Q9NZQ9 345 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 SUGT1Q9Y2Z0 365 aa9.52□□□□□ -0.89
HDAC9-219ENST00000461159 hCG_1642624A0A1W2PR95 340 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 DDTLA6NHG4 134 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-219ENST00000461159 KIF4AO95239 1232 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 CENPFP49454 3210 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 MNAT1P51948 309 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 ARHGAP29Q52LW3 1261 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 APOA5Q6Q788 366 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 TMCO3Q6UWJ1 677 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 FMR1NBQ8N0W7 255 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-219ENST00000461159 ENAHQ8N8S7 591 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-219ENST00000461159 UBXN4Q92575 508 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 BICD1Q96G01 975 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 AIFM3Q96NN9 605 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 YIPF2Q9BWQ6 316 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-219ENST00000461159 CNNM2Q9H8M5 875 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 RTEL1Q9NZ71 1219 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 LMCD1Q9NZU5 365 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 IFNKQ9P0W0 207 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 KIAA1468Q9P260 1216 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 PHLPP2Q6ZVD8 1323 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 KIF5CO60282 957 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 AP1G2O75843 785 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 ECM2O94769 699 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-219ENST00000461159 VIL1P09327 827 aaKnown RBP9.51□□□□□ -0.89
HDAC9-219ENST00000461159 CLCN6P51797 869 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 WTAPQ15007 396 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 SOGA3Q5TF21 947 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 HHIPL2Q6UWX4 724 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 SAMD7Q7Z3H4 446 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 TRIM42Q8IWZ5 723 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 KCNG4Q8TDN1 519 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 ZDHHC15Q96MV8 337 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 TRIM7Q9C029 511 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 PCDHA7Q9UN72 937 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 STX8Q9UNK0 236 aa9.51□□□□□ -0.89
HDAC9-219ENST00000461159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms