RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 KIF1BPQ96EK5 621 aa20.58■□□□□ 0.89
TOP3A-202ENST00000461127 ACAD9Q9H845 621 aa20.58■□□□□ 0.89
TOP3A-202ENST00000461127 CERS4Q9HA82 394 aa20.58■□□□□ 0.89
TOP3A-202ENST00000461127 MUC6Q6W4X9 2439 aa20.58■□□□□ 0.88
TOP3A-202ENST00000461127 GRIN2DO15399 1336 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 LRRC37A2A6NM11 1700 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 CNTN2Q02246 1040 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 TTLL4Q14679 1199 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 SLFNL1Q499Z3 407 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 FAM133AQ8N9E0 248 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 AGBL1Q96MI9 1066 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 SLC9A7Q96T83 725 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 CLIP2Q9UDT6 1046 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 Q9Y3F1 56 aa20.57■□□□□ 0.88
TOP3A-202ENST00000461127 GREB1LQ9C091 1923 aaPredicted RBP20.57■□□□□ 0.88
TOP3A-202ENST00000461127 KIF28PB7ZC32 967 aa20.56■□□□□ 0.88
TOP3A-202ENST00000461127 RASA1P20936 1047 aa20.56■□□□□ 0.88
TOP3A-202ENST00000461127 PSMC6P62333 389 aa20.56■□□□□ 0.88
TOP3A-202ENST00000461127 UBE3CQ15386 1083 aa20.56■□□□□ 0.88
TOP3A-202ENST00000461127 IQSEC1Q6DN90 963 aa20.56■□□□□ 0.88
TOP3A-202ENST00000461127 DEFB128Q7Z7B8 93 aa20.56■□□□□ 0.88
TOP3A-202ENST00000461127 ARNTL2Q8WYA1 636 aa20.56■□□□□ 0.88
TOP3A-202ENST00000461127 BCL11AQ9H165 835 aa20.56■□□□□ 0.88
TOP3A-202ENST00000461127 ALDH8A1Q9H2A2 487 aaPredicted RBP20.56■□□□□ 0.88
TOP3A-202ENST00000461127 SMPD1P17405 629 aa20.55■□□□□ 0.88
TOP3A-202ENST00000461127 ZSCAN25Q6NSZ9 544 aa20.55■□□□□ 0.88
TOP3A-202ENST00000461127 PHOSPHO2Q8TCD6 241 aa20.55■□□□□ 0.88
TOP3A-202ENST00000461127 BOLA2Q9H3K6 86 aa20.55■□□□□ 0.88
TOP3A-202ENST00000461127 MYH4Q9Y623 1939 aa20.55■□□□□ 0.88
TOP3A-202ENST00000461127 VWCEQ96DN2 955 aa20.54■□□□□ 0.88
TOP3A-202ENST00000461127 ZNF287Q9HBT7 754 aa20.54■□□□□ 0.88
TOP3A-202ENST00000461127 A1CFQ9NQ94 594 aaKnown RBP20.54■□□□□ 0.88
TOP3A-202ENST00000461127 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
TOP3A-202ENST00000461127 SYNPO2Q9UMS6 1093 aa20.54■□□□□ 0.88
TOP3A-202ENST00000461127 SOWAHBA6NEL2 793 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 RFC2P35250 354 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 TAP1Q03518 808 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 TKFCQ3LXA3 575 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 SBK1Q52WX2 424 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 KRT40Q6A162 431 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 RPAP2Q8IXW5 612 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-202ENST00000461127 STK11IPQ8N1F8 1099 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 RNF146Q9NTX7 359 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 POLR3EQ9NVU0 708 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 TNKSO95271 1327 aa20.53■□□□□ 0.88
TOP3A-202ENST00000461127 FAM86C2PA6NEL3 165 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 EPOPA6NHQ4 379 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 CYP2C9P11712 490 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 RLBP1P12271 317 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 BMP3P12645 472 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 ATP5JP18859 108 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 ZNF444Q8N0Y2 327 aaPredicted RBP20.52■□□□□ 0.88
TOP3A-202ENST00000461127 GMCL1P1Q8NEA9 526 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 MKL1Q969V6 931 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 HAUS7Q99871 368 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 TRMT13Q9NUP7 481 aaKnown RBP20.52■□□□□ 0.88
TOP3A-202ENST00000461127 MYH7P12883 1935 aa20.52■□□□□ 0.88
TOP3A-202ENST00000461127 MINDY4BA8MYZ0 360 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 PI4K2BG5E9Z4 385 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 TTLL1O95922 423 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 STAT2P52630 851 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
TOP3A-202ENST00000461127 KIAA1211Q6ZU35 1233 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 EEPD1Q7L9B9 569 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 FBXO16Q8IX29 292 aaPredicted RBP20.51■□□□□ 0.87
TOP3A-202ENST00000461127 RETREG2Q8NC44 543 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 CHURC1Q8WUH1 139 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 FTOQ9C0B1 505 aaKnown RBP eCLIP20.51■□□□□ 0.87
TOP3A-202ENST00000461127 PUS7LQ9H0K6 701 aaKnown RBP20.51■□□□□ 0.87
TOP3A-202ENST00000461127 VTA1Q9NP79 307 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 C11orf16Q9NQ32 467 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 PDGFCQ9NRA1 345 aa20.51■□□□□ 0.87
TOP3A-202ENST00000461127 TMEM232C9JQI7 657 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 HMMRO75330 724 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 GRB10Q13322 594 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 SLFN13Q68D06 897 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 TAPT1Q6NXT6 567 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 GIMAP6Q6P9H5 292 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 ALYREFQ86V81 257 aaKnown RBP20.5■□□□□ 0.87
TOP3A-202ENST00000461127 FAM160B2Q86V87 743 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 HERC6Q8IVU3 1022 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 LRRC47Q8N1G4 583 aaKnown RBP20.5■□□□□ 0.87
TOP3A-202ENST00000461127 CEP95Q96GE4 821 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 GPHNQ9NQX3 736 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-202ENST00000461127 MTMR4Q9NYA4 1195 aa20.5■□□□□ 0.87
TOP3A-202ENST00000461127 IGKV6D-41A0A0C4DH26 115 aa20.49■□□□□ 0.87
TOP3A-202ENST00000461127 CHGBP05060 677 aa20.49■□□□□ 0.87
TOP3A-202ENST00000461127 ALAS1P13196 640 aa20.49■□□□□ 0.87
TOP3A-202ENST00000461127 PTGS1P23219 599 aa20.49■□□□□ 0.87
TOP3A-202ENST00000461127 CPT1AP50416 773 aa20.49■□□□□ 0.87
TOP3A-202ENST00000461127 FAM47CQ5HY64 1035 aa20.49■□□□□ 0.87
TOP3A-202ENST00000461127 KHSRPQ92945 711 aaKnown RBP eCLIP20.49■□□□□ 0.873e-8■■■■□ 22.5
TOP3A-202ENST00000461127 LMCD1Q9NZU5 365 aa20.49■□□□□ 0.87
TOP3A-202ENST00000461127 SCN5AQ14524 2016 aa20.49■□□□□ 0.87
TOP3A-202ENST00000461127 BRWD1Q9NSI6 2320 aa20.49■□□□□ 0.87
TOP3A-202ENST00000461127 PITPNM1O00562 1244 aa20.48■□□□□ 0.87
TOP3A-202ENST00000461127 RAB11FIP3O75154 756 aa20.48■□□□□ 0.87
TOP3A-202ENST00000461127 DUSP28Q4G0W2 176 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms