RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 PCDHA5Q9Y5H7 936 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 EDIL3O43854 480 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
IFT88-204ENST00000461115 SLURP2P0DP57 97 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 ATP2B1P20020 1258 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 PTGER2P43116 358 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 JAG1P78504 1218 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 ICA1Q05084 483 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 PNOCQ13519 176 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 TNIP1Q15025 636 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 INF2Q27J81 1249 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 SPECC1Q5M775 1068 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 ZSCAN29Q8IWY8 852 aaPredicted RBP12.35□□□□□ -0.43
IFT88-204ENST00000461115 REXO1Q8N1G1 1221 aaKnown RBP12.35□□□□□ -0.43
IFT88-204ENST00000461115 RASGRP4Q8TDF6 673 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 PIBF1Q8WXW3 757 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 DPF2Q92785 391 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 ERCC4Q92889 916 aaPredicted RBP12.35□□□□□ -0.43
IFT88-204ENST00000461115 EPSTI1Q96J88 318 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 HSD3B7Q9H2F3 369 aa12.35□□□□□ -0.43
IFT88-204ENST00000461115 FRMPD2Q68DX3 1309 aaPredicted RBP12.35□□□□□ -0.43
IFT88-204ENST00000461115 FAM196BA6NMK8 535 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 F5H6K3 240 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 GOLGA6L19H0YKK7 550 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 MPHOSPH10O00566 681 aaKnown RBP12.34□□□□□ -0.43
IFT88-204ENST00000461115 PLA2G6O60733 806 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 BMP6P22004 513 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 MCM7P33993 719 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 ADCY7P51828 1080 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 EIF6P56537 245 aaKnown RBP12.34□□□□□ -0.43
IFT88-204ENST00000461115 KLRC3Q07444 240 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 DPYDQ12882 1025 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 RBM26Q5T8P6 1007 aaKnown RBP12.34□□□□□ -0.43
IFT88-204ENST00000461115 MCTP2Q6DN12 878 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 PPP4R3AQ6IN85 833 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 TTBK2Q6IQ55 1244 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 PDXDC2PQ6P474 469 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 NEK8Q86SG6 692 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 HOMER1Q86YM7 354 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 MLKLQ8NB16 471 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 MS4A4AQ96JQ5 239 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 GSDMAQ96QA5 445 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 TMEM60Q9H2L4 133 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 GPCPD1Q9NPB8 672 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 GINM1Q9NU53 330 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 TMX2Q9Y320 296 aa12.34□□□□□ -0.43
IFT88-204ENST00000461115 VWA3AA6NCI4 1184 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 FZD9O00144 591 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 WNT10BO00744 389 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 FOXN1O15353 648 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 NDUFB10O96000 172 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 MYL1P05976 194 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 SLC1A4P43007 532 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 ZRSR1Q15695 479 aaKnown RBP12.33□□□□□ -0.44
IFT88-204ENST00000461115 ZNF710Q8N1W2 664 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 AOPEPQ8N6M6 819 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 IQUBQ8NA54 791 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 JDP2Q8WYK2 163 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 PAGE5Q96GU1 130 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 MTMR9Q96QG7 549 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 VAT1LQ9HCJ6 419 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 MAN1B1Q9UKM7 699 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 SBF1O95248 1867 aa12.33□□□□□ -0.44
IFT88-204ENST00000461115 A0A087WWV3 80 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 A0A1W2PRG0 241 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 SMCHD1A6NHR9 2005 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 BECN2A8MW95 431 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 USP17L10C9JJH3 530 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 GH2P01242 217 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 ERCC5P28715 1186 aaPredicted RBP12.32□□□□□ -0.44
IFT88-204ENST00000461115 MRPL12P52815 198 aaKnown RBP12.32□□□□□ -0.44
IFT88-204ENST00000461115 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
IFT88-204ENST00000461115 QRICH1Q2TAL8 776 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 MOXD1Q6UVY6 613 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 DTHD1Q6ZMT9 781 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 KCTD1Q719H9 257 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 IGSF22Q8N9C0 903 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 TBCKQ8TEA7 893 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 CRYGNQ8WXF5 182 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 SMARCE1Q969G3 411 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 COA7Q96BR5 231 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 MBOAT7Q96N66 472 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 CUEDC2Q9H467 287 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.32□□□□□ -0.44
IFT88-204ENST00000461115 MAGEF1Q9HAY2 307 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 ZBTB21Q9ULJ3 1066 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 MTMR7Q9Y216 660 aa12.32□□□□□ -0.44
IFT88-204ENST00000461115 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 TCP10L2B9ZVM9 353 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
IFT88-204ENST00000461115 SMC2O95347 1197 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 GDF11O95390 407 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 OR52Z1P0C646 297 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 BMP3P12645 472 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 ENOX1Q8TC92 643 aaKnown RBP12.31□□□□□ -0.44
IFT88-204ENST00000461115 CUL5Q93034 780 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms