RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 RAB11FIP4Q86YS3 637 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 CLEC4DQ8WXI8 215 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 DEFB118Q96PH6 123 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 CYTH3O43739 400 aa23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 CASTP20810 708 aaKnown RBP23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 CCND3P30281 292 aaPredicted RBP23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 GJA8P48165 433 aa23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 APOA5Q6Q788 366 aa23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 SYNE3Q6ZMZ3 975 aa23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 FBXO11Q86XK2 927 aa23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 U2AF1L4Q8WU68 220 aaKnown RBP23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 TINF2Q9BSI4 451 aa23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 CYP39A1Q9NYL5 469 aa23.31■■□□□ 1.32
SNAPC3-204ENST00000461041 POTEB2H3BUK9 544 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 ZBTB5O15062 677 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 FGD1P98174 961 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 CNTN2Q02246 1040 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 Q6ZUG5 572 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 MICU3Q86XE3 530 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 CCDC144CPQ8IYA2 1237 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 FAM133AQ8N9E0 248 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 FGD4Q96M96 766 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 BRPF3Q9ULD4 1205 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 ABCB11O95342 1321 aa23.3■■□□□ 1.32
SNAPC3-204ENST00000461041 SGPL1O95470 568 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 SEC24BO95487 1268 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 CYBAP13498 195 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 GNAQP50148 359 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 ZNF467Q7Z7K2 595 aaPredicted RBP23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 HOMER1Q86YM7 354 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 MSL3Q8N5Y2 521 aaKnown RBP23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 FANCBQ8NB91 859 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 TRPV1Q8NER1 839 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 SHISA4Q96DD7 197 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 PIGSQ96S52 555 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 LZTS2Q9BRK4 669 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 ZSWIM6Q9HCJ5 1215 aa23.29■■□□□ 1.32
SNAPC3-204ENST00000461041 MYH6P13533 1939 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 KLF18A0A0U1RQI7 1052 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 PLEKHA8P1O95397 391 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 SMARCA1P28370 1054 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 BAATQ14032 418 aaPredicted RBP23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 PRAMEF19Q5SWL8 479 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 MAMDC4Q6UXC1 1216 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 RUFY3Q7L099 469 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 SPZ1Q9BXG8 430 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 AMNQ9BXJ7 453 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 TM6SF1Q9BZW5 370 aa23.28■■□□□ 1.32
SNAPC3-204ENST00000461041 KIAA0100Q14667 2235 aaKnown RBP23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 PTPDC1A2A3K4 754 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 SOWAHBA6NEL2 793 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 ZBTB43O43298 467 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 PPP1R11O60927 126 aaPredicted RBP23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 CNGA1P29973 690 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 C8orf34Q49A92 452 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 FBXL16Q8N461 479 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 SRBD1Q8N5C6 995 aaKnown RBP23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 BRF1Q92994 677 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 CRISPLD2Q9H0B8 497 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 MRPL11Q9Y3B7 192 aaKnown RBP23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 CYP46A1Q9Y6A2 500 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 SYNGAP1Q96PV0 1343 aa23.27■■□□□ 1.32
SNAPC3-204ENST00000461041 PNMA6FA0A0J9YX94 578 aa23.26■■□□□ 1.31
SNAPC3-204ENST00000461041 APOBRQ0VD83 1088 aa23.26■■□□□ 1.31
SNAPC3-204ENST00000461041 SLC30A10Q6XR72 485 aa23.26■■□□□ 1.31
SNAPC3-204ENST00000461041 RNF207Q6ZRF8 634 aa23.26■■□□□ 1.31
SNAPC3-204ENST00000461041 CMTR1Q8N1G2 835 aaKnown RBP23.26■■□□□ 1.31
SNAPC3-204ENST00000461041 AGXT2Q9BYV1 514 aa23.26■■□□□ 1.31
SNAPC3-204ENST00000461041 NRBP1Q9UHY1 535 aa23.26■■□□□ 1.31
SNAPC3-204ENST00000461041 LCTP09848 1927 aa23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 SNAI1O95863 264 aaPredicted RBP23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 TFRCP02786 760 aaKnown RBP23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 ANAPC15P60006 121 aa23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 TMTC3Q6ZXV5 915 aa23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 RGS22Q8NE09 1264 aa23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 PIBF1Q8WXW3 757 aa23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 PURBQ96QR8 312 aaKnown RBP23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 UPF3BQ9BZI7 483 aaKnown RBP23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 NAP1L2Q9ULW6 460 aaPredicted RBP23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 PCDHA1Q9Y5I3 950 aa23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 GTF3C3Q9Y5Q9 886 aa23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 ASTN1O14525 1302 aa23.25■■□□□ 1.31
SNAPC3-204ENST00000461041 GOLGA8AA7E2F4 631 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 GOLGA8BA8MQT2 603 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 CAPN2P17655 700 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 CALML3P27482 149 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 RCAN1P53805 252 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 RPS6P62753 249 aaKnown RBP23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 TRAF1Q13077 416 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 RTN1Q16799 776 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 LHX8Q68G74 356 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 ARMCX2Q7L311 632 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 RRP36Q96EU6 259 aaKnown RBP23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 MAF1Q9H063 256 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 RBM28Q9NW13 759 aaKnown RBP23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 DDX20Q9UHI6 824 aaKnown RBP23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 CNPY2Q9Y2B0 182 aa23.24■■□□□ 1.31
SNAPC3-204ENST00000461041 BAZ2BQ9UIF8 2168 aaKnown RBP23.23■■□□□ 1.31
SNAPC3-204ENST00000461041 SEPT4O43236 478 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms