RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 RBM28Q9NW13 759 aaKnown RBP16.25■□□□□ 0.19
HDLBP-229ENST00000460826 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
HDLBP-229ENST00000460826 STRNO43815 780 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 COBLO75128 1261 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 LARGE1O95461 756 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 PGK2P07205 417 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 FCER1AP12319 257 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 MAP2K5Q13163 448 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 STK3Q13188 491 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 FBXO11Q86XK2 927 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 RAET1EQ8TD07 263 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 SOCS4Q8WXH5 440 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 CLEC4DQ8WXI8 215 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 ZNF274Q96GC6 653 aaPredicted RBP16.24■□□□□ 0.19
HDLBP-229ENST00000460826 CENPFP49454 3210 aa16.24■□□□□ 0.19
HDLBP-229ENST00000460826 PNMA6FA0A0J9YX94 578 aa16.23■□□□□ 0.19
HDLBP-229ENST00000460826 NFIBO00712 420 aa16.23■□□□□ 0.19
HDLBP-229ENST00000460826 ELNP15502 786 aa16.23■□□□□ 0.19
HDLBP-229ENST00000460826 RGS2P41220 211 aa16.23■□□□□ 0.19
HDLBP-229ENST00000460826 IRF5Q13568 498 aa16.23■□□□□ 0.19
HDLBP-229ENST00000460826 PKN2Q16513 984 aaKnown RBP16.23■□□□□ 0.19
HDLBP-229ENST00000460826 ABRAQ8N0Z2 381 aa16.23■□□□□ 0.19
HDLBP-229ENST00000460826 NPLOC4Q8TAT6 608 aa16.23■□□□□ 0.19
HDLBP-229ENST00000460826 AMNQ9BXJ7 453 aa16.23■□□□□ 0.19
HDLBP-229ENST00000460826 A1CFQ9NQ94 594 aaKnown RBP16.23■□□□□ 0.19
HDLBP-229ENST00000460826 FBXO40Q9UH90 709 aa16.23■□□□□ 0.19
HDLBP-229ENST00000460826 ADCY3O60266 1144 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 PPFIA3O75145 1194 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 KCTD2Q14681 263 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 PPP2R5BQ15173 497 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 RABEP1Q15276 862 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 ANKRD1Q15327 319 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 NTRK3Q16288 839 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 CCL14Q16627 93 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 TBC1D5Q92609 795 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 RRP36Q96EU6 259 aaKnown RBP16.22■□□□□ 0.19
HDLBP-229ENST00000460826 APBA2Q99767 749 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 FLRT1Q9NZU1 646 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
HDLBP-229ENST00000460826 ABCB11O95342 1321 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 DNAJC25-GNG10A0A024R161 153 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 OPLAHO14841 1288 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 PFKFB2O60825 505 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 DTNBO60941 627 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 HOXC6P09630 235 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 SCRN1Q12765 414 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 ME3Q16798 604 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 NSMFQ6X4W1 530 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 DPP9Q86TI2 863 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 SH3TC2Q8TF17 1288 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 TRIB2Q92519 343 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 DDX11Q96FC9 970 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 FGD4Q96M96 766 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 CYP39A1Q9NYL5 469 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
HDLBP-229ENST00000460826 KIAA0100Q14667 2235 aaKnown RBP16.21■□□□□ 0.18
HDLBP-229ENST00000460826 CCDC196A0A1B0GTZ2 297 aa16.2■□□□□ 0.18
HDLBP-229ENST00000460826 XRCC5P13010 732 aaKnown RBP16.2■□□□□ 0.18
HDLBP-229ENST00000460826 GRK4P32298 578 aa16.2■□□□□ 0.18
HDLBP-229ENST00000460826 CNTN2Q02246 1040 aa16.2■□□□□ 0.18
HDLBP-229ENST00000460826 TRIM32Q13049 653 aa16.2■□□□□ 0.18
HDLBP-229ENST00000460826 ZNF792Q3KQV3 632 aa16.2■□□□□ 0.18
HDLBP-229ENST00000460826 SLC30A10Q6XR72 485 aa16.2■□□□□ 0.18
HDLBP-229ENST00000460826 NECAB1Q8N987 351 aa16.2■□□□□ 0.18
HDLBP-229ENST00000460826 GPKOWQ92917 476 aaPredicted RBP eCLIP16.2■□□□□ 0.18
HDLBP-229ENST00000460826 PHKBQ93100 1093 aa16.2■□□□□ 0.18
HDLBP-229ENST00000460826 PURBQ96QR8 312 aaKnown RBP16.2■□□□□ 0.18
HDLBP-229ENST00000460826 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
HDLBP-229ENST00000460826 V9GY48 417 aaPredicted RBP16.2■□□□□ 0.18
HDLBP-229ENST00000460826 CD2BP2O95400 341 aaKnown RBP16.19■□□□□ 0.18
HDLBP-229ENST00000460826 IFNAR1P17181 557 aa16.19■□□□□ 0.18
HDLBP-229ENST00000460826 ST3GAL1Q11201 340 aa16.19■□□□□ 0.18
HDLBP-229ENST00000460826 BAATQ14032 418 aaPredicted RBP16.19■□□□□ 0.18
HDLBP-229ENST00000460826 TNS4Q8IZW8 715 aa16.19■□□□□ 0.18
HDLBP-229ENST00000460826 FAM133AQ8N9E0 248 aa16.19■□□□□ 0.18
HDLBP-229ENST00000460826 SLAIN1Q8ND83 568 aa16.19■□□□□ 0.18
HDLBP-229ENST00000460826 PXYLP1Q8TE99 480 aa16.19■□□□□ 0.18
HDLBP-229ENST00000460826 MAML3Q96JK9 1138 aa16.19■□□□□ 0.18
HDLBP-229ENST00000460826 SLKQ9H2G2 1235 aaPredicted RBP16.19■□□□□ 0.18
HDLBP-229ENST00000460826 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
HDLBP-229ENST00000460826 ASTN1O14525 1302 aa16.19■□□□□ 0.18
HDLBP-229ENST00000460826 PFASO15067 1338 aa16.19■□□□□ 0.18
HDLBP-229ENST00000460826 PTPDC1A2A3K4 754 aa16.18■□□□□ 0.18
HDLBP-229ENST00000460826 POTEB2H3BUK9 544 aa16.18■□□□□ 0.18
HDLBP-229ENST00000460826 IGHA2P01877 340 aa16.18■□□□□ 0.18
HDLBP-229ENST00000460826 PKN1Q16512 942 aa16.18■□□□□ 0.18
HDLBP-229ENST00000460826 SLC9C1Q4G0N8 1177 aa16.18■□□□□ 0.18
HDLBP-229ENST00000460826 WWC2Q6AWC2 1192 aa16.18■□□□□ 0.18
HDLBP-229ENST00000460826 TYW1BQ6NUM6 668 aa16.18■□□□□ 0.18
HDLBP-229ENST00000460826 GTF3C6Q969F1 213 aa16.18■□□□□ 0.18
HDLBP-229ENST00000460826 SLC26A6Q9BXS9 759 aa16.18■□□□□ 0.18
HDLBP-229ENST00000460826 LRRC37A2A6NM11 1700 aa16.17■□□□□ 0.18
HDLBP-229ENST00000460826 SOWAHBA6NEL2 793 aa16.17■□□□□ 0.18
HDLBP-229ENST00000460826 PRPF3O43395 683 aaKnown RBP16.17■□□□□ 0.18
HDLBP-229ENST00000460826 CTDNEP1O95476 244 aa16.17■□□□□ 0.18
HDLBP-229ENST00000460826 INHAP05111 366 aa16.17■□□□□ 0.18
HDLBP-229ENST00000460826 CALML3P27482 149 aa16.17■□□□□ 0.18
HDLBP-229ENST00000460826 RPS6P62753 249 aaKnown RBP16.17■□□□□ 0.18
HDLBP-229ENST00000460826 RNF207Q6ZRF8 634 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms