RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 MYLIPQ8WY64 445 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 EXOC2Q96KP1 924 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 SLC6A18Q96N87 628 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 NCOA5Q9HCD5 579 aaKnown RBP4.05□□□□□ -1.76
HPS3-203ENST00000460822 RGS13O14921 159 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 LRRN2O75325 713 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 RAPGEF3O95398 923 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 POU3F3P20264 500 aaPredicted RBP4.05□□□□□ -1.76
HPS3-203ENST00000460822 HSP90AB2PQ58FF8 381 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 CCDC181Q5TID7 509 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 TDRD10Q5VZ19 366 aaKnown RBP4.05□□□□□ -1.76
HPS3-203ENST00000460822 PPFIBP1Q86W92 1011 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 OXR1Q8N573 874 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 UBR7Q8N806 425 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 LIN37Q96GY3 246 aaPredicted RBP4.05□□□□□ -1.76
HPS3-203ENST00000460822 SGSM3Q96HU1 749 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 CEP89Q96ST8 783 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 PPP1R16BQ96T49 567 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 CDC6Q99741 560 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.05□□□□□ -1.76
HPS3-203ENST00000460822 ARHGEF4Q9NR80 690 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 SUGT1Q9Y2Z0 365 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 DNAJC25-GNG10A0A024R161 153 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 A0A087X0B3 334 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 A0A1W2PQU0 124 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 WASH4PA8MWX3 477 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 TP53P04637 393 aaPredicted RBP4.04□□□□□ -1.76
HPS3-203ENST00000460822 DUSP4Q13115 394 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 BBS9Q3SYG4 887 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 ZC3H12BQ5HYM0 836 aaKnown RBP4.04□□□□□ -1.76
HPS3-203ENST00000460822 RALGPS1Q5JS13 557 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 FAM209AQ5JX71 171 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 TMEM192Q8IY95 271 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 PPP1R14AQ96A00 147 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 ADAMTS10Q9H324 1103 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 CAAP1Q9H8G2 361 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 FAN1Q9Y2M0 1017 aa4.04□□□□□ -1.76
HPS3-203ENST00000460822 MRPS23Q9Y3D9 190 aaKnown RBP4.04□□□□□ -1.76
HPS3-203ENST00000460822 CCDC163A0A0D9SF12 145 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 ZNF503-AS2A6NEH8 195 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 KCNQ2O43526 872 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 EPHX1P07099 455 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 SRFP11831 508 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 CCNFP41002 786 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 PMS1P54277 932 aaKnown RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 PPP2R2AP63151 447 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 ZNF124Q15973 351 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 DDX42Q86XP3 938 aaKnown RBP eCLIP4.03□□□□□ -1.76
HPS3-203ENST00000460822 SPPL2CQ8IUH8 684 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 ENOX1Q8TC92 643 aaKnown RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 KISS1RQ969F8 398 aaPredicted RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 DHRS1Q96LJ7 313 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 HAUS7Q99871 368 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 DHRS4Q9BTZ2 278 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 LGR4Q9BXB1 951 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 LRP2BPQ9P2M1 347 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 PCDHA11Q9Y5I1 949 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 ANKRD34BA5PLL1 514 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 C9IYK1 514 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 CBFA2T2O43439 604 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 UBOX5O94941 541 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 SOX5P35711 763 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 NFKB2Q00653 900 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 EXOSC10Q01780 885 aaKnown RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 FAM50AQ14320 339 aaKnown RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 GAB4Q2WGN9 574 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 PRR23BQ6ZRT6 265 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 RNF180Q86T96 592 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 FMNL3Q8IVF7 1028 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 LILRA2Q8N149 483 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 FBXO15Q8NCQ5 510 aaPredicted RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 PDZD8Q8NEN9 1154 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 CLUHP3Q96NS8 147 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 IPO9Q96P70 1041 aaKnown RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 DIRC2Q96SL1 478 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 NSUN3Q9H649 340 aaKnown RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 C19orf73Q9NVV2 129 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.03□□□□□ -1.76
HPS3-203ENST00000460822 SUCOQ9UBS9 1254 aaKnown RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 APEX2Q9UBZ4 518 aa4.03□□□□□ -1.76
HPS3-203ENST00000460822 THRAP3Q9Y2W1 955 aaKnown RBP4.03□□□□□ -1.76
HPS3-203ENST00000460822 TRBV23-1A0A0A0MS06 115 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 TRAV20A0A0B4J274 112 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 FITM1A5D6W6 292 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 PLD2O14939 933 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 CLEC3AO75596 197 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 RFPL3O75679 317 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 HPXP02790 462 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 NAT2P11245 290 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 RAP1GAPP47736 663 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 ZNF143P52747 638 aaPredicted RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 NMIQ13287 307 aaPredicted RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 BRDTQ58F21 947 aaPredicted RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 DCAF15Q66K64 600 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 SYDE1Q6ZW31 735 aaPredicted RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 BHLHE22Q8NFJ8 381 aaPredicted RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 AARSD1Q9BTE6 412 aaKnown RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 TARS2Q9BW92 718 aaKnown RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 EPB41L4BQ9H329 900 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 DCP1AQ9NPI6 582 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms