RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 CD248Q9HCU0 757 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 PIH1D3Q9NQM4 214 aaKnown RBP17.26■□□□□ 0.35
SSR4-206ENST00000460616 GTPBP6O43824 516 aaPredicted RBP17.26■□□□□ 0.35
SSR4-206ENST00000460616 XBP1P17861 261 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 PRCPP42785 496 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 ITIH3Q06033 890 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 PPARAQ07869 468 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 ALX1Q15699 326 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 MFSD6Q6ZSS7 791 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 ZNF507Q8TCN5 953 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 PURBQ96QR8 312 aaKnown RBP17.26■□□□□ 0.35
SSR4-206ENST00000460616 ISCA1Q9BUE6 129 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 NAPBQ9H115 298 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 EPN3Q9H201 632 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 RMND1Q9NWS8 449 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 ERVV-1B6SEH8 477 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
SSR4-206ENST00000460616 NAP1L1P55209 391 aaKnown RBP17.25■□□□□ 0.35
SSR4-206ENST00000460616 CYP27A1Q02318 531 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 AKNAD1Q5T1N1 836 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 TRAPPC3LQ5T215 181 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 SH2D3CQ8N5H7 860 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 ZKSCAN4Q969J2 545 aaPredicted RBP17.25■□□□□ 0.35
SSR4-206ENST00000460616 MTRQ99707 1265 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 AGPAT5Q9NUQ2 364 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 TFCP2L1Q9NZI6 479 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 IQSEC3Q9UPP2 1182 aaPredicted RBP17.25■□□□□ 0.35
SSR4-206ENST00000460616 TACC3Q9Y6A5 838 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 MYO5AQ9Y4I1 1855 aaKnown RBP17.25■□□□□ 0.35
SSR4-206ENST00000460616 ERICH2A1L162 156 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 PDE6AP16499 860 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 LSP1P33241 339 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 KRT2P35908 639 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 RNF187Q5TA31 235 aaPredicted RBP17.25■□□□□ 0.35
SSR4-206ENST00000460616 ZNF572Q7Z3I7 529 aaPredicted RBP17.25■□□□□ 0.35
SSR4-206ENST00000460616 CAVIN3Q969G5 261 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 ZIM3Q96PE6 472 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 STIM2Q9P246 746 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 GDAQ9Y2T3 454 aa17.25■□□□□ 0.35
SSR4-206ENST00000460616 RPN1P04843 607 aaKnown RBP17.24■□□□□ 0.35
SSR4-206ENST00000460616 NEDD9Q14511 834 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 NAA35Q5VZE5 725 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 PDXDC2PQ6P474 469 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 TMTC2Q8N394 836 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 TRIM58Q8NG06 486 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 KLC4Q9NSK0 619 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 TRIM49BA6NDI0 452 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 WNT7AO00755 349 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 KRT14P02533 472 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 TRIM21P19474 475 aaKnown RBP17.24■□□□□ 0.35
SSR4-206ENST00000460616 EEF1GP26641 437 aaKnown RBP17.24■□□□□ 0.35
SSR4-206ENST00000460616 PTGDRQ13258 359 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 BICDL1Q6ZP65 573 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
SSR4-206ENST00000460616 PAGR1Q9BTK6 254 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 TSGA10Q9BZW7 698 aa17.24■□□□□ 0.35
SSR4-206ENST00000460616 PRLRP16471 622 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 RFC4P35249 363 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 DNM2P50570 870 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 VAV2P52735 878 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 GUCY1A3Q02108 690 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 KDM7AQ6ZMT4 941 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 EP400NLQ6ZTU2 488 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 UPF1Q92900 1129 aaKnown RBP eCLIP17.23■□□□□ 0.35
SSR4-206ENST00000460616 SHISA4Q96DD7 197 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 C21orf2O43822 256 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 TACC1O75410 805 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 SMTNP53814 917 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 SPA17Q15506 151 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 CCDC96Q2M329 555 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 METTL24Q5JXM2 366 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 TBC1D9BQ66K14 1250 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 NLRP10Q86W26 655 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 ZNF34Q8IZ26 560 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 SMCR8Q8TEV9 937 aaPredicted RBP17.23■□□□□ 0.35
SSR4-206ENST00000460616 ZNF473Q8WTR7 871 aaKnown RBP17.23■□□□□ 0.35
SSR4-206ENST00000460616 PYM1Q9BRP8 204 aaKnown RBP17.23■□□□□ 0.35
SSR4-206ENST00000460616 NUP58Q9BVL2 599 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 EPB41L4AQ9HCS5 686 aaPredicted RBP17.23■□□□□ 0.35
SSR4-206ENST00000460616 MAGEC2Q9UBF1 373 aaPredicted RBP17.23■□□□□ 0.35
SSR4-206ENST00000460616 LRWD1Q9UFC0 647 aa17.23■□□□□ 0.35
SSR4-206ENST00000460616 ZPR1O75312 459 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
SSR4-206ENST00000460616 ACTN3Q08043 901 aaPredicted RBP17.22■□□□□ 0.35
SSR4-206ENST00000460616 IFIT5Q13325 482 aaKnown RBP17.22■□□□□ 0.35
SSR4-206ENST00000460616 CCDC40Q4G0X9 1142 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 FKBP15Q5T1M5 1219 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 CCDC181Q5TID7 509 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 ZNF654Q8IZM8 581 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 PHF20Q9BVI0 1012 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 RNF26Q9BY78 433 aaPredicted RBP17.22■□□□□ 0.35
SSR4-206ENST00000460616 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
SSR4-206ENST00000460616 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 TCRBV5S4A2TA0A5A2 114 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 B4DLN1 442 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 USO1O60763 962 aaKnown RBP17.22■□□□□ 0.35
SSR4-206ENST00000460616 ZBED6P86452 979 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms