RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 FGD4Q96M96 766 aa20.7■□□□□ 0.9
PLOD3-209ENST00000460475 MAF1Q9H063 256 aa20.7■□□□□ 0.9
PLOD3-209ENST00000460475 RIOX1Q9H6W3 641 aa20.7■□□□□ 0.9
PLOD3-209ENST00000460475 CYP39A1Q9NYL5 469 aa20.7■□□□□ 0.9
PLOD3-209ENST00000460475 MCM3APO60318 1980 aa20.7■□□□□ 0.9
PLOD3-209ENST00000460475 QRICH1Q2TAL8 776 aa20.69■□□□□ 0.9
PLOD3-209ENST00000460475 LHX8Q68G74 356 aa20.69■□□□□ 0.9
PLOD3-209ENST00000460475 UBE2Q1Q7Z7E8 422 aa20.69■□□□□ 0.9
PLOD3-209ENST00000460475 LRRC2Q9BYS8 371 aa20.69■□□□□ 0.9
PLOD3-209ENST00000460475 SYNGAP1Q96PV0 1343 aa20.69■□□□□ 0.9
PLOD3-209ENST00000460475 CCDC69A6NI79 296 aa20.68■□□□□ 0.9
PLOD3-209ENST00000460475 POTEB2H3BUK9 544 aa20.68■□□□□ 0.9
PLOD3-209ENST00000460475 TAL1P17542 331 aaPredicted RBP20.68■□□□□ 0.9
PLOD3-209ENST00000460475 SMARCA1P28370 1054 aa20.68■□□□□ 0.9
PLOD3-209ENST00000460475 CNTN2Q02246 1040 aa20.68■□□□□ 0.9
PLOD3-209ENST00000460475 RGS22Q8NE09 1264 aa20.68■□□□□ 0.9
PLOD3-209ENST00000460475 VAT1LQ9HCJ6 419 aa20.68■□□□□ 0.9
PLOD3-209ENST00000460475 OGDHLQ9ULD0 1010 aa20.68■□□□□ 0.9
PLOD3-209ENST00000460475 LCTP09848 1927 aa20.68■□□□□ 0.9
PLOD3-209ENST00000460475 NFIBO00712 420 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 CYTH3O43739 400 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 MSCO60682 206 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 TFRCP02786 760 aaKnown RBP20.67■□□□□ 0.9
PLOD3-209ENST00000460475 CALM1P0DP23 149 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 CALM2P0DP24 149 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 CALM3P0DP25 149 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 KIF5BP33176 963 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 NFXL1Q6ZNB6 911 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 FBXL16Q8N461 479 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 ANKLE1Q8NAG6 615 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 NUP133Q8WUM0 1156 aa20.67■□□□□ 0.9
PLOD3-209ENST00000460475 SOWAHBA6NEL2 793 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 ZBTB5O15062 677 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 DHX16O60231 1041 aaKnown RBP20.66■□□□□ 0.9
PLOD3-209ENST00000460475 SNAI1O95863 264 aaPredicted RBP20.66■□□□□ 0.9
PLOD3-209ENST00000460475 NSMFQ6X4W1 530 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 FBXO11Q86XK2 927 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 CTCFLQ8NI51 663 aaPredicted RBP20.66■□□□□ 0.9
PLOD3-209ENST00000460475 JAKMIP1Q96N16 626 aaKnown RBP20.66■□□□□ 0.9
PLOD3-209ENST00000460475 LZTS2Q9BRK4 669 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 MYL10Q9BUA6 226 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 SPZ1Q9BXG8 430 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 DDX20Q9UHI6 824 aaKnown RBP20.66■□□□□ 0.9
PLOD3-209ENST00000460475 SLC12A7Q9Y666 1083 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 ABCB11O95342 1321 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 FRMPD3Q5JV73 1810 aa20.66■□□□□ 0.9
PLOD3-209ENST00000460475 SEPT4O43236 478 aa20.65■□□□□ 0.9
PLOD3-209ENST00000460475 PSMA5P28066 241 aa20.65■□□□□ 0.9
PLOD3-209ENST00000460475 GNAQP50148 359 aa20.65■□□□□ 0.9
PLOD3-209ENST00000460475 BAATQ14032 418 aaPredicted RBP20.65■□□□□ 0.9
PLOD3-209ENST00000460475 USH1GQ495M9 461 aa20.65■□□□□ 0.9
PLOD3-209ENST00000460475 PRAMEF19Q5SWL8 479 aa20.65■□□□□ 0.9
PLOD3-209ENST00000460475 TCEANC2Q96MN5 208 aa20.65■□□□□ 0.9
PLOD3-209ENST00000460475 AMNQ9BXJ7 453 aa20.65■□□□□ 0.9
PLOD3-209ENST00000460475 ASTN1O14525 1302 aa20.64■□□□□ 0.89
PLOD3-209ENST00000460475 LOC102724159A0A0B4J2E5 919 aa20.64■□□□□ 0.89
PLOD3-209ENST00000460475 EIF5BO60841 1220 aaKnown RBP20.64■□□□□ 0.89
PLOD3-209ENST00000460475 PPP1R11O60927 126 aaPredicted RBP20.64■□□□□ 0.89
PLOD3-209ENST00000460475 ZNF865P0CJ78 1059 aaPredicted RBP20.64■□□□□ 0.89
PLOD3-209ENST00000460475 PWP2Q15269 919 aaKnown RBP20.64■□□□□ 0.89
PLOD3-209ENST00000460475 APOA5Q6Q788 366 aa20.64■□□□□ 0.89
PLOD3-209ENST00000460475 BLOC1S2Q6QNY1 142 aa20.64■□□□□ 0.89
PLOD3-209ENST00000460475 FANCBQ8NB91 859 aa20.64■□□□□ 0.89
PLOD3-209ENST00000460475 AGXT2Q9BYV1 514 aa20.64■□□□□ 0.89
PLOD3-209ENST00000460475 CNPY2Q9Y2B0 182 aa20.64■□□□□ 0.89
PLOD3-209ENST00000460475 PNMA6FA0A0J9YX94 578 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 CPA1P15085 419 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 RPS6KB1P23443 525 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 CNGA1P29973 690 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 MNX1P50219 401 aaPredicted RBP20.63■□□□□ 0.89
PLOD3-209ENST00000460475 RCAN1P53805 252 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 RPS6P62753 249 aaKnown RBP20.63■□□□□ 0.89
PLOD3-209ENST00000460475 GHRHRQ02643 423 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 TRAF1Q13077 416 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 RNF207Q6ZRF8 634 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 MORC4Q8TE76 937 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 PIGSQ96S52 555 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 TM6SF1Q9BZW5 370 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 ABHD16BQ9H3Z7 469 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.63■□□□□ 0.89
PLOD3-209ENST00000460475 BRPF3Q9ULD4 1205 aa20.63■□□□□ 0.89
PLOD3-209ENST00000460475 MRPL11Q9Y3B7 192 aaKnown RBP20.63■□□□□ 0.89
PLOD3-209ENST00000460475 ASB14A6NK59 587 aa20.62■□□□□ 0.89
PLOD3-209ENST00000460475 FARP2O94887 1054 aaPredicted RBP20.62■□□□□ 0.89
PLOD3-209ENST00000460475 SYNE3Q6ZMZ3 975 aa20.62■□□□□ 0.89
PLOD3-209ENST00000460475 ARMCX2Q7L311 632 aa20.62■□□□□ 0.89
PLOD3-209ENST00000460475 CCDC144CPQ8IYA2 1237 aa20.62■□□□□ 0.89
PLOD3-209ENST00000460475 KATNBL1Q9H079 304 aa20.62■□□□□ 0.89
PLOD3-209ENST00000460475 ZSWIM6Q9HCJ5 1215 aa20.62■□□□□ 0.89
PLOD3-209ENST00000460475 ADD3Q9UEY8 706 aaKnown RBP20.62■□□□□ 0.89
PLOD3-209ENST00000460475 PTPDC1A2A3K4 754 aa20.61■□□□□ 0.89
PLOD3-209ENST00000460475 OPLAHO14841 1288 aa20.61■□□□□ 0.89
PLOD3-209ENST00000460475 RXRAP19793 462 aa20.61■□□□□ 0.89
PLOD3-209ENST00000460475 CASTP20810 708 aaKnown RBP20.61■□□□□ 0.89
PLOD3-209ENST00000460475 SLC30A10Q6XR72 485 aa20.61■□□□□ 0.89
PLOD3-209ENST00000460475 MCF2L2Q86YR7 1114 aa20.61■□□□□ 0.89
PLOD3-209ENST00000460475 SRBD1Q8N5C6 995 aaKnown RBP20.61■□□□□ 0.89
PLOD3-209ENST00000460475 PURBQ96QR8 312 aaKnown RBP20.61■□□□□ 0.89
PLOD3-209ENST00000460475 PCDHA1Q9Y5I3 950 aa20.61■□□□□ 0.89
PLOD3-209ENST00000460475 ZBTB43O43298 467 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms