RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 KIAA1024Q9UPX6 916 aa16.28■□□□□ 0.2
PTPRU-205ENST00000460170 SNAP23O00161 211 aa16.28■□□□□ 0.2
PTPRU-205ENST00000460170 KCNK3O14649 394 aa16.28■□□□□ 0.2
PTPRU-205ENST00000460170 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
PTPRU-205ENST00000460170 MIER3Q7Z3K6 550 aa16.28■□□□□ 0.2
PTPRU-205ENST00000460170 KCNQ4P56696 695 aa16.28■□□□□ 0.2
PTPRU-205ENST00000460170 ARID5BQ14865 1188 aa16.28■□□□□ 0.2
PTPRU-205ENST00000460170 ASIC3Q9UHC3 531 aa16.28■□□□□ 0.2
PTPRU-205ENST00000460170 NEDD4P46934 1319 aa16.28■□□□□ 0.2
PTPRU-205ENST00000460170 CEP128Q6ZU80 1094 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 ANKRD13CQ8N6S4 541 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 SWAP70Q9UH65 585 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 NBPF26B4DH59 902 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 ARL6IP4Q66PJ3 421 aaKnown RBP16.27■□□□□ 0.2
PTPRU-205ENST00000460170 NBPF10Q6P3W6 841 aaKnown RBP16.27■□□□□ 0.2
PTPRU-205ENST00000460170 FAM178BQ8IXR5 827 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 NBPF15Q8N660 670 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 SREK1Q8WXA9 508 aaKnown RBP16.27■□□□□ 0.2
PTPRU-205ENST00000460170 AMNQ9BXJ7 453 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.2
PTPRU-205ENST00000460170 PLEKHA8P1O95397 391 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 TTLL1O95922 423 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 POLR2MP0CAP2 368 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 GOLGA5Q8TBA6 731 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 DYNLL2Q96FJ2 89 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 PLEKHA4Q9H4M7 779 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 RABEP2Q9H5N1 569 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 MKRN1Q9UHC7 482 aaKnown RBP16.27■□□□□ 0.2
PTPRU-205ENST00000460170 KIAA1210Q9ULL0 1709 aa16.27■□□□□ 0.2
PTPRU-205ENST00000460170 BBOX1O75936 387 aa16.27■□□□□ 0.19
PTPRU-205ENST00000460170 NT5C2P49902 561 aa16.27■□□□□ 0.19
PTPRU-205ENST00000460170 TRPC3Q13507 836 aa16.27■□□□□ 0.19
PTPRU-205ENST00000460170 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.19
PTPRU-205ENST00000460170 DGKHQ86XP1 1220 aa16.27■□□□□ 0.19
PTPRU-205ENST00000460170 PIGSQ96S52 555 aa16.27■□□□□ 0.19
PTPRU-205ENST00000460170 IQGAP1P46940 1657 aa16.27■□□□□ 0.19
PTPRU-205ENST00000460170 CPS1P31327 1500 aa16.27■□□□□ 0.19
PTPRU-205ENST00000460170 TMEM232C9JQI7 657 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 hCG_1984214I3L0E3 225 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 H2AFZP0C0S5 128 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 ABCB4P21439 1286 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 TRIM28Q13263 835 aaKnown RBP16.26■□□□□ 0.19
PTPRU-205ENST00000460170 H2AFVQ71UI9 128 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 CCDC105Q8IYK2 499 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 ZNF713Q8N859 430 aaPredicted RBP16.26■□□□□ 0.19
PTPRU-205ENST00000460170 STK17AQ9UEE5 414 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 GTF2A1P52655 376 aaPredicted RBP16.26■□□□□ 0.19
PTPRU-205ENST00000460170 DIXDC1Q155Q3 683 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 RAB17Q9H0T7 212 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 GCFC2P16383 781 aaKnown RBP16.26■□□□□ 0.19
PTPRU-205ENST00000460170 CYP4A11Q02928 519 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 ALX1Q15699 326 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 CCDC6Q16204 474 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 TMTC3Q6ZXV5 915 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 LARSQ9P2J5 1176 aaKnown RBP16.26■□□□□ 0.19
PTPRU-205ENST00000460170 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 ATP8B1O43520 1251 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 SETDB1Q15047 1291 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 ZSCAN26Q16670 478 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 LONRF2Q1L5Z9 754 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 CEP57Q86XR8 500 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 GPATCH11Q8N954 259 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 PANX2Q96RD6 677 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 SOWAHDA6NJG2 315 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 KRT71Q3SY84 523 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
PTPRU-205ENST00000460170 FNBP4Q8N3X1 1017 aaPredicted RBP16.26■□□□□ 0.19
PTPRU-205ENST00000460170 ZNF579Q8NAF0 562 aaKnown RBP16.26■□□□□ 0.19
PTPRU-205ENST00000460170 MAK16Q9BXY0 300 aaKnown RBP16.26■□□□□ 0.19
PTPRU-205ENST00000460170 ENC1O14682 589 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 CCNE1P24864 410 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 USP17L2Q6R6M4 530 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 STOX1Q6ZVD7 989 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 ATG9AQ7Z3C6 839 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 APBA3O96018 575 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 INPP5BP32019 993 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 FKBP3Q00688 224 aaKnown RBP16.25■□□□□ 0.19
PTPRU-205ENST00000460170 MAN2A1Q16706 1144 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 ABCB5Q2M3G0 1257 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 NLGN1Q8N2Q7 840 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 LY9Q9HBG7 655 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 PALLDQ8WX93 1383 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 SERPINB2P05120 415 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 GUCY2FP51841 1108 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 FLAD1Q8NFF5 587 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 HOOK2Q96ED9 719 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 MED4Q9NPJ6 270 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 MXRA7P84157 204 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 EXOC3L4Q17RC7 722 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 NIM1KQ8IY84 436 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 CCDC63Q8NA47 563 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 KCNG1Q9UIX4 513 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 NRXN1Q9ULB1 1477 aa16.25■□□□□ 0.19
PTPRU-205ENST00000460170 USP17L3A6NCW0 530 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 USP17L4A6NCW7 530 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms