RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 CKAP4Q07065 602 aaKnown RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 MTF1Q14872 753 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 KARSQ15046 597 aaKnown RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 ZNF174Q15697 407 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 TSR1Q2NL82 804 aaKnown RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 CRY2Q49AN0 593 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 MAP9Q49MG5 647 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 EARS2Q5JPH6 523 aaKnown RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 MSL1Q68DK7 614 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 KLHL10Q6JEL2 608 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 PRR5LQ6MZQ0 368 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 ADGRA1Q86SQ6 560 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 SLC35F6Q8N357 371 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 TTLL6Q8N841 843 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 MB21D1Q8N884 522 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 MIGA1Q8NAN2 632 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 GIMAP8Q8ND71 665 aaPredicted RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 GOLGA5Q8TBA6 731 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 FAM71BQ8TC56 605 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 ZNF507Q8TCN5 953 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 SDR42E1Q8WUS8 393 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 NELFBQ8WX92 580 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 NSUN4Q96CB9 384 aaKnown RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 FAM84BQ96KN1 310 aaPredicted RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 CRAMP1Q96RY5 1269 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 DESI2Q9BSY9 194 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 EDEM3Q9BZQ6 932 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 LZTFL1Q9NQ48 299 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 DISC1Q9NRI5 854 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 ZNHIT6Q9NWK9 470 aaKnown RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 ADAM21Q9UKJ8 722 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 MYO6Q9UM54 1294 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 PCDHA4Q9UN74 947 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 MINPP1Q9UNW1 487 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 CTNND2Q9UQB3 1225 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 LUC7L2Q9Y383 392 aaKnown RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 EPN1Q9Y6I3 576 aaPredicted RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 COL4A1P02462 1669 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 FAM205CA6NFA0 338 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 EIF3CLB5ME19 914 aaKnown RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 USP17L12C9JPN9 530 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 USP17L21D6R901 530 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 hCG_1984214I3L0E3 225 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 KRT86O43790 486 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 KLRC4O43908 158 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 SEC31AO94979 1220 aaKnown RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 IVLP07476 585 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 SRGNP10124 158 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 ATP2B1P20020 1258 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 HNRNPH3P31942 346 aaKnown RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 STAT6P42226 847 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 PRCPP42785 496 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 AARSP49588 968 aaKnown RBP eCLIP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 HNRNPH2P55795 449 aaKnown RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 STX17P56962 302 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 ZBED6P86452 979 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 AMPD3Q01432 767 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 DDR1Q08345 913 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 GRM4Q14833 912 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 DALRD3Q5D0E6 543 aaKnown RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 IQCEQ6IPM2 695 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 CNNM4Q6P4Q7 775 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 DTHD1Q6ZMT9 781 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 TRAPPC11Q7Z392 1133 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 ZNF572Q7Z3I7 529 aaPredicted RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 IRF2BP1Q8IU81 584 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 RTKN2Q8IZC4 609 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 CCDC82Q8N4S0 544 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 ZNF713Q8N859 430 aaPredicted RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 RBM17Q96I25 401 aaKnown RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 PURBQ96QR8 312 aaKnown RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 ERGIC2Q96RQ1 377 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 NUP88Q99567 741 aaPredicted RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 EIF3CQ99613 913 aaKnown RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 MTRQ99707 1265 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 C7orf25Q9BPX7 421 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 TSGA10Q9BZW7 698 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 DCP1AQ9NPI6 582 aaPredicted RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 MAGEC2Q9UBF1 373 aaPredicted RBP6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 ABCF2Q9UG63 623 aa6.87□□□□□ -1.31
UBQLN4-202ENST00000459954 LOXHD1Q8IVV2 1947 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 ZC3H4Q9UPT8 1303 aaKnown RBP6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 ARFGEF1Q9Y6D6 1849 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 CCDC194A0A1B0GVG4 234 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 A6NNZ2 444 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 SLC26A4O43511 780 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 LCA5LO95447 670 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 FGFR1OPO95684 399 aaKnown RBP6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 CCNE1P24864 410 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 ACTN2P35609 894 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 USP14P54578 494 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 PPP4CP60510 307 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 GSTO1P78417 241 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 UBXN1Q04323 297 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 GPR162Q16538 588 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 IL17AQ16552 155 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 TUBB8Q3ZCM7 444 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 HSP90AA4PQ58FG1 418 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 RCSD1Q6JBY9 416 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 TTI2Q6NXR4 508 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms