RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	SOWAHB	A6NEL2	793 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	COPB2	P35606	906 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	CNTN2	Q02246	1040 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	TKFC	Q3LXA3	575 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	USH1G	Q495M9	461 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	TRPV1	Q8NER1	839 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	PIBF1	Q8WXW3	757 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	MAML3	Q96JK9	1138 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	SPZ1	Q9BXG8	430 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	UNC93B1	Q9H1C4	597 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	ACAD9	Q9H845	621 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	CWC22	Q9HCG8	908 aa	Known RBP	11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	CYP46A1	Q9Y6A2	500 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	CNTNAP5	Q8WYK1	1306 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	POTEF	A5A3E0	1075 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	GOLGA8A	A7E2F4	631 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	GOLGA8B	A8MQT2	603 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	ZBTB5	O15062	677 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	ZBTB43	O43298	467 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	DHX16	O60231	1041 aa	Known RBP	11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	HMGCR	P04035	888 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	CYP2C19	P33261	490 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	CACNB2	Q08289	660 aa	Predicted RBP	11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	KCTD2	Q14681	263 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	SLC30A10	Q6XR72	485 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	HOMER1	Q86YM7	354 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	FAM133A	Q8N9E0	248 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	CTCFL	Q8NI51	663 aa	Predicted RBP	11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	CYP39A1	Q9NYL5	469 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	FBXO40	Q9UH90	709 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	LCT	P09848	1927 aa		11.93	□□□□□ -0.5
MRPL55-223	ENST00000459783	DTNB	O60941	627 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	CALM1	P0DP23	149 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	CALM2	P0DP24	149 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	CALM3	P0DP25	149 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	CCL5	P13501	91 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	PRKAR2A	P13861	404 aa	Known RBP	11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	PDIA3	P30101	505 aa	Known RBP	11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	CCND3	P30281	292 aa	Predicted RBP	11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	KIF5B	P33176	963 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	ADD1	P35611	737 aa	Known RBP	11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	RCAN1	P53805	252 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	SOX10	P56693	466 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	BAAT	Q14032	418 aa	Predicted RBP	11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	NTRK3	Q16288	839 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	RTN1	Q16799	776 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	OLFML2B	Q68BL8	750 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	NSMF	Q6X4W1	530 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	DPP9	Q86TI2	863 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	FBXO11	Q86XK2	927 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	CCDC82	Q8N4S0	544 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	NCOA5	Q9HCD5	579 aa	Known RBP	11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	PDRG1	Q9NUG6	133 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	COL20A1	Q9P218	1284 aa		11.92	□□□□□ -0.5
MRPL55-223	ENST00000459783	PNMA6F	A0A0J9YX94	578 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	PPFIA3	O75145	1194 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	LARGE1	O95461	756 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	SNAI1	O95863	264 aa	Predicted RBP	11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	CYBA	P13498	195 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	SMARCA1	P28370	1054 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	RBM25	P49756	843 aa	Known RBP	11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	AK2	P54819	239 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	PRAMEF19	Q5SWL8	479 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	ANKRD35	Q8N283	1001 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	SHISA4	Q96DD7	197 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	DDX11	Q96FC9	970 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	PAK6	Q9NQU5	681 aa	Predicted RBP	11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	TPCN1	Q9ULQ1	816 aa		11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	DIS3	Q9Y2L1	958 aa	Known RBP	11.91	□□□□□ -0.5
MRPL55-223	ENST00000459783	ABCB11	O95342	1321 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	POTEB2	H3BUK9	544 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	GNAQ	P50148	359 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	METAP2	P50579	478 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	RPS6	P62753	249 aa	Known RBP	11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	CCT2	P78371	535 aa	Known RBP	11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	FGD1	P98174	961 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	ST3GAL1	Q11201	340 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	TYW1B	Q6NUM6	668 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	MAMDC4	Q6UXC1	1216 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	SYNE3	Q6ZMZ3	975 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	LZTS2	Q9BRK4	669 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	TINF2	Q9BSI4	451 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	AMN	Q9BXJ7	453 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	BACH2	Q9BYV9	841 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	C22orf23	Q9BZE7	217 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	KATNBL1	Q9H079	304 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	BIN2	Q9UBW5	565 aa	Predicted RBP	11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	PCDHA1	Q9Y5I3	950 aa		11.9	□□□□□ -0.5
MRPL55-223	ENST00000459783	PFAS	O15067	1338 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	PTPDC1	A2A3K4	754 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	ADAMTS3	O15072	1205 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	ADCY6	O43306	1168 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	EN2	P19622	333 aa	Predicted RBP	11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	CALML3	P27482	149 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	UBXN2A	P68543	259 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms