RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 SUGT1Q9Y2Z0 365 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 ANXA13P27216 316 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 PHBP35232 272 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 DBN1Q16643 649 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 ZNF513Q8N8E2 541 aaPredicted RBP17.55■□□□□ 0.4
HDAC7-217ENST00000459625 ANKRD36BP1Q96IX9 119 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 PCIF1Q9H4Z3 704 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 SLC39A2Q9NP94 309 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 PHEXP78562 749 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 GCKRQ14397 625 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 OPHN1O60890 802 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 POLR2BP30876 1174 aaKnown RBP17.55■□□□□ 0.4
HDAC7-217ENST00000459625 TBCCQ15814 346 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 LRGUKQ96M69 825 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 XAB2Q9HCS7 855 aaKnown RBP17.55■□□□□ 0.4
HDAC7-217ENST00000459625 G3BP2Q9UN86 482 aaKnown RBP17.55■□□□□ 0.4
HDAC7-217ENST00000459625 ZNF148Q9UQR1 794 aa17.55■□□□□ 0.4
HDAC7-217ENST00000459625 POC1B-GALNT4F8VUJ3 575 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 SLFN13Q68D06 897 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 BBS5Q8N3I7 341 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 GJA10Q969M2 543 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 LZTS2Q9BRK4 669 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 JAK2O60674 1132 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 SERPINB6P35237 376 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-217ENST00000459625 TFDP1Q14186 410 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 SCARA5Q6ZMJ2 495 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 PLEKHM2Q8IWE5 1019 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 ARHGAP24Q8N264 748 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 NXF1Q9UBU9 619 aaKnown RBP17.54■□□□□ 0.4
HDAC7-217ENST00000459625 SNX1Q13596 522 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 SDCCAG3Q96C92 435 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 CTSWP56202 376 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 C17orf53Q8N3J3 647 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-217ENST00000459625 ATP8A2Q9NTI2 1148 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 SLC8A2Q9UPR5 921 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
HDAC7-217ENST00000459625 GSTA4O15217 222 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 TROVE2P10155 538 aaKnown RBP eCLIP17.54■□□□□ 0.4
HDAC7-217ENST00000459625 POLR2FP61218 127 aaKnown RBP17.54■□□□□ 0.4
HDAC7-217ENST00000459625 ABCC1P33527 1531 aa17.54■□□□□ 0.4
HDAC7-217ENST00000459625 KRIT1O00522 736 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 RGS16O15492 202 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 RNF8O76064 485 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 RXRBP28702 533 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 SLC16A2P36021 539 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 CFAP221Q4G0U5 840 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 FAM49AQ9H0Q0 323 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 KDM3AQ9Y4C1 1321 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 DNAAF3Q8N9W5 541 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 SLC12A6Q9UHW9 1150 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 TFAMQ00059 246 aaKnown RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 RAB44Q7Z6P3 723 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 TOPBP1Q92547 1522 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 EFCAB5A4FU69 1503 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 HNRNPDLO14979 420 aaKnown RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 MYOCDQ8IZQ8 938 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 NT5C3AQ9H0P0 336 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 SUCLA2Q9P2R7 463 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 ARPP21Q9UBL0 812 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 NFE2L3Q9Y4A8 694 aa17.53■□□□□ 0.4
HDAC7-217ENST00000459625 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 DDX41Q9UJV9 622 aaKnown RBP17.53■□□□□ 0.4
HDAC7-217ENST00000459625 GARSP41250 739 aaKnown RBP17.52■□□□□ 0.4
HDAC7-217ENST00000459625 CLNS1AP54105 237 aaKnown RBP17.52■□□□□ 0.4
HDAC7-217ENST00000459625 P3H4Q92791 437 aa17.52■□□□□ 0.4
HDAC7-217ENST00000459625 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.4
HDAC7-217ENST00000459625 PDE1BQ01064 536 aa17.52■□□□□ 0.4
HDAC7-217ENST00000459625 RNF10Q8N5U6 811 aaKnown RBP17.52■□□□□ 0.4
HDAC7-217ENST00000459625 GPC4O75487 556 aa17.52■□□□□ 0.4
HDAC7-217ENST00000459625 TSNAXIP1Q2TAA8 658 aa17.52■□□□□ 0.4
HDAC7-217ENST00000459625 RETREG2Q8NC44 543 aa17.52■□□□□ 0.4
HDAC7-217ENST00000459625 PDCD6IPQ8WUM4 868 aaKnown RBP17.52■□□□□ 0.4
HDAC7-217ENST00000459625 PIDD1Q9HB75 910 aa17.52■□□□□ 0.4
HDAC7-217ENST00000459625 MAP3K19Q56UN5 1328 aa17.52■□□□□ 0.4
HDAC7-217ENST00000459625 STMN1P16949 149 aa17.52■□□□□ 0.39
HDAC7-217ENST00000459625 ZSCAN10Q96SZ4 725 aaPredicted RBP17.52■□□□□ 0.39
HDAC7-217ENST00000459625 HS1BP3Q53T59 392 aa17.52■□□□□ 0.39
HDAC7-217ENST00000459625 SLC10A4Q96EP9 437 aa17.52■□□□□ 0.39
HDAC7-217ENST00000459625 HAUS8Q9BT25 410 aa17.52■□□□□ 0.39
HDAC7-217ENST00000459625 SRGAP2CP0DJJ0 459 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 TRAPPC10P48553 1259 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 NLRP12P59046 1061 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 NSUN2Q08J23 767 aaKnown RBP eCLIP17.51■□□□□ 0.39
HDAC7-217ENST00000459625 RCN2Q14257 317 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 MAIP1Q8WWC4 291 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 ZNF577Q9BSK1 485 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 FAM8A1Q9UBU6 413 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 SNX14Q9Y5W7 946 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 PTPN23Q9H3S7 1636 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 DPYSL4O14531 572 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 VAMP4O75379 141 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 ATP2B4P23634 1241 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 ARHGAP4P98171 946 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 KLRF2D3W0D1 207 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 NEMP1O14524 444 aa17.51■□□□□ 0.39
HDAC7-217ENST00000459625 MTERF2Q49AM1 385 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms